Skip to Main Content U.S. Department of Energy
Ecology

Recent Publications

537 publications found:

2019

  • Chen M., C.R. Vernon, M. Huang, K.V. Calvin, and I.P. Kraucunas. 2019. "Calibration and analysis of the uncertainty in downscaling global land use and land cover projections from GCAM using Demeter (v1.0.0)." Geoscientific Model Development 12, no. 5:1753–1764. PNNL-SA-143284. doi:10.5194/gmd-12-1753-2019
  • Gao Z., H. Liu, J.E. Missik, J. Yao, M. Huang, X. Chen, and E.V. Arntzen, et al. 2019. "Mechanistic links between underestimated CO2 fluxes and non-closure of the surface energy balance in a semi-arid sagebrush ecosystem." Environmental Research Letters 14, no. 4:Article Number 044016. PNNL-SA-142139. doi:10.1088/1748-9326/ab082d
  • Garavelli L., T.J. Linley, B.J. Bellgraph, B.M. Rhode, J.M. Janak, and A. Colotelo. 2019. "Evaluation of Passage and sorting of Adult Pacific Salmonids through a Novel Fish Passage Technology." Fisheries Research 212. PNNL-SA-136651. doi:10.1016/j.fishres.2018.12.010
  • Harding S.F., M.C. Richmond, and R.P. Mueller. 2019. "Experimental observation of inertial particles through idealized hydroturbine distributor geometry." Water 11, no. 3:471. PNNL-SA-132240. doi:10.3390/w11030471
  • Hou Z., T.D. Scheibe, C.J. Murray, W.A. Perkins, E.V. Arntzen, H. Ren, and R.D. Mackley, et al. 2019. "Identification and mapping of riverbed sediment facies in the Columbia River through integration of field observations and numerical simulations." Hydrological Processes 33, no. 8:1245-1259. PNNL-SA-123667. doi:10.1002/hyp.13396
  • Huang Z., M.I. Hejazi, Q. Tang, C.R. Vernon, Y. Liu, M. Chen, and K.V. Calvin. 2019. "Global agricultural green and blue water consumption under future climate and land use changes." Journal of Hydrology 574. PNNL-SA-137028. doi:10.1016/j.jhydrol.2019.04.046
  • Martinez J.J., Z. Deng, C. Tian, R.P. Mueller, O. Phonekhampeng, D. Singhanouvong, and G. Thorncraft, et al. 2019. "In Situ Characterization of Turbine Hydraulic Environment to Support Development of Fish-Friendly Hydropower Guidelines in the Lower Mekong River Region." Ecological Engineering 133. PNNL-SA-126844. doi:10.1016/j.ecoleng.2019.04.028
  • Martinez J.J., Z. Deng, E. Klopries, R.P. Mueller, P. Titzler, D. Zhou, and B. Do Vale Beirao, et al. 2019. "Characterization of a Siphon Turbine to Accelerate Low-Head Hydropower Deployment." Journal of Cleaner Production 210. PNNL-SA-136060. doi:10.1016/j.jclepro.2018.10.345
  • Martinez J.J., Z. Deng, P. Titzler, J.P. Duncan, J. Lu, R.P. Mueller, and C. Tian, et al. 2019. "Hydraulic and Biological Characterization of a Large Kaplan Turbine." Renewable Energy 131. PNNL-SA-123309. doi:10.1016/j.renene.2018.07.034
  • Missik J.E., H. Liu, Z. Gao, M. Huang, X. Chen, E.V. Arntzen, and D.P. McFarland, et al. 2019. "Groundwater-River Water Exchange Enhances Growing Season Evapotranspiration and Carbon Uptake in a Semiarid Riparian Ecosystem." Journal of Geophysical Research. Biogeosciences 124, no. 1:99-114. PNNL-SA-142097. doi:10.1029/2018JG004666
  • Mueller R.P., S.A. Liss, and Z. Deng. 2019. "Methods for Implantation of a New Micro Acoustic Tag in Juvenile Pacific Lamprey and American Eel." Journal of Visualized Experiments 145. PNNL-SA-137246. doi:10.3791/59274
  • Pflugrath B.D., C.A. Boys, B. Cathers, and Z. Deng. 2019. "Over or under? Autonomous Sensor Fish reveals why overshot weirs may be safer than undershot weirs for fish passage." Ecological Engineering 132. PNNL-SA-138119. doi:10.1016/j.ecoleng.2019.03.010
  • Pflugrath B.D., R.A. Harnish, B.M. Rhode, B. Do Vale Beirao, K.M. Engbrecht, J.R. Stephenson, and A. Colotelo. 2019. "American Eel state of buoyancy and barotrauma susceptibility associated with hydroturbine passage." Knowledge and Management of Aquatic Ecosystems. PNNL-SA-138255. doi:10.1051/kmae/2019012
  • Shin Y., M.N. Taufique, R. Devanathan, E.C. Cutsforth, J. Lee, W. Liu, and L.S. Fifield, et al. 2019. "Highly Selective Supported Graphene Oxide Membranes for Water-Ethanol Separation." Scientific Reports 9, no. 1:Article No. 2251. PNNL-SA-130472. doi:10.1038/s41598-019-38485-y
  • Vernon C.R., M.I. Hejazi, S. Turner, Y. Liu, C.J. Braun, X. Li, and R.P. Link. 2019. "A Global Hydrologic Framework to Accelerate Scientific Discovery." Journal of Open Research Software 7, no. 1:Article No. 1. PNNL-SA-137438. doi:10.5334/jors.245

2018

  • Arola D.D., S.C. Murcia Sanchez, M. Stossel, R. Pahuja, T.J. Linley, A. Devaraj, and M. Ramulu, et al. 2018. "The limiting layer of fish scales: structure and properties." Acta Biomaterialia 67. PNNL-SA-136535. doi:10.1016/j.actbio.2017.12.011
  • Bao J., T. Zhou, M. Huang, Z. Hou, W.A. Perkins, S.F. Harding, and P. Titzler, et al. 2018. "Modulating factors of hydrologic exchanges in a large-scale river reach: Insights from three-dimensional computational fluid dynamics simulations." Hydrological Processes 32, no. 23:3446-3463. PNNL-SA-123673. doi:10.1002/hyp.13266
  • Chen Y., P.V. Etingov, E.B. Fitzhenry, P. Sharma, T.B. Nguyen, Y.V. Makarov, and M.J. Rice, et al. 2018. "Bringing Probabilistic Analysis Capability from Planning to Operation." Control Engineering Practice 71. PNNL-SA-118424. doi:10.1016/j.conengprac.2017.06.006
  • Colotelo A., R.P. Mueller, R.A. Harnish, J.J. Martinez, T. Phommavong, K. Phommachan, and G.A. Thorncraft, et al. 2018. "Injury and Mortality of Two Mekong River Species Exposed to Turbulent Shear Forces." Marine and Freshwater Research 69, no. 12:1945–1953. PNNL-SA-132777. doi:10.1071/MF18126
  • Demirkanli D.I., M.J. Truex, J.E. Szecsody, M. Snyder, J.J. Moran, M.K. Nims, and A.R. Lawter, et al. 2018. Contaminant Attenuation and Transport Characterization of 200-DV-1 Operable Unit Sediment Samples from Boreholes C9497, C9498, C9603, C9488, and C9513. PNNL-27524. Richland, WA: Pacific Northwest National Laboratory.
  • Do Vale Beirao B., L.G. Silva, R.S. Brown, and R.W. Walker. 2018. "Determining Barotrauma in the Pictus Catfish, Pimelodus pictus, Experimentally Exposed to Simulated Hydropower Turbine Passage." Marine and Freshwater Research 69, no. 12:1913-1921. PNNL-SA-136222. doi:10.1071/MF18142
  • Duncan J.P., M.R. Sackschewsky, M.D. Ellefson, J.M. Becker, J.M. Barnett, T.W. Moon, and E.P. Kennedy, et al. 2018. Pacific Northwest National Laboratory Annual Site Environmental Report for Calendar Year 2017. PNNL-27831. Richland, WA: Pacific Northwest National Laboratory. Pacific Northwest National Laboratory Annual Site Environmental Report for Calendar Year 2017
  • Duncan J.P., Z. Deng, J.L. Arnold, T. Fu, B.A. Trumbo, T.J. Carlson, and D. Zhou. 2018. "Physical and Ecological Evaluation of a Fish-Friendly Surface Spillway." Ecological Engineering 110. PNNL-SA-126408. doi:10.1016/j.ecoleng.2017.10.012
  • Garavelli L., M. Studivan, J. Voss, A. Kuba, J. Figueiredo, and L.M. Cherubin. 2018. "Assessment of Mesophotic Coral Ecosystem Connectivity for Proposed Expansion of a Marine Sanctuary in the Northwest Gulf of Mexico: Larval Dynamics." Frontiers in Marine Science 5. PNNL-SA-138213. doi:10.3389/fmars.2018.00174
  • Geist D.R., S.A. Liss, R.A. Harnish, K.A. Deters, R.S. Brown, Z. Deng, and J.J. Martinez, et al. 2018. "Juvenile Chinook Salmon survival when exposed to simulated dam passage after being implanted with a new micro-acoustic transmitter." North American Journal of Fisheries Management 38, no. 4:940-952. PNNL-SA-130560. doi:10.1002/nafm.10198
  • Graham E.B., A.R. Crump, D.W. Kennedy, E.V. Arntzen, S.J. Fansler, S.O. Purvine, and C.D. Nicora, et al. 2018. "Multi ‘omics comparison reveals metabolome biochemistry, not microbiome composition or gene expression, corresponds to elevated biogeochemical function in the hyporheic zone." Science of the Total Environment 642. PNNL-SA-133671. doi:10.1016/j.scitotenv.2018.05.256
  • Graham N.T., E. Davies, M.I. Hejazi, K.V. Calvin, S.H. Kim, L. Helinski, and F. Miralles-Wilhelm, et al. 2018. "Water Sector Assumptions for the Shared Socioeconomic Pathways in an Integrated Modeling framework." Water Resources Research 54, no. 9:6423-6440. PNNL-SA-126476. doi:10.1029/2018WR023452
  • Hou H., Z. Deng, J.J. Martinez, T. Fu, J.P. Duncan, G.E. Johnson, and J. Lu, et al. 2018. "A Hydropower Biological Evaluation Toolset (HBET) for Characterizing Hydraulic Conditions and Impacts of Hydro-Structures on Fish." Energies 11, no. 4:990. PNNL-SA-124812. doi:10.3390/en11040990
  • Huang Z., M.I. Hejazi, X. Li, Q. Tang, C.R. Vernon, G. Leng, and Y. Liu, et al. 2018. "Reconstruction of global gridded monthly sectoral water withdrawals for 1971-2010 and analysis of their spatiotemporal patterns." Hydrology and Earth System Sciences 22, no. 4:2117-2133. PNNL-SA-129126. doi:10.5194/hess-22-2117-2018
  • Lee B.D., J.J. Moran, M.K. Nims, and D.L. Saunders. 2018. Letter Report: Stable Hydrogen and Oxygen Isotope Analysis of B-Complex Groundwater Samples. PNNL-27357. Richland, WA: Pacific Northwest National Laboratory. Letter Report: Stable Hydrogen and Oxygen Isotope Analysis of B-Complex Groundwater Samples
  • Li X., Z. Deng, T. Fu, R.S. Brown, J.J. Martinez, G.A. Mcmichael, and B.A. Trumbo, et al. 2018. "Three-dimensional migration behavior of juvenile salmonids in reservoirs and near dams." Scientific Reports 8. PNWD-SA-10471. doi:10.1038/s41598-018-19208-1
  • Liss S.A., N.K. Ashton, R.S. Brown, R.W. Walker, P. Bates, C. Klassen, and S. Backhouse. 2018. "Evaluation of four surgical implantation techniques for age-0 white sturgeon (Acipenser transmontanus Richardson, 1836) with a new acoustic transmitter." Journal of Applied Ichthyology 34, no. 2:382-389. PNNL-SA-123234. doi:10.1111/jai.13564
  • Moran J.J., C.G. Fraga, and M.K. Nims. 2018. "Stable-Carbon Isotope Ratios for Sourcing the Nerve-Agent Precursor Methylphosphonic Dichloride and Its Products." Talanta 186. PNNL-SA-130651. doi:10.1016/j.talanta.2018.04.021
  • Rockhold M.L., J.L. Downs, S.R. Waichler, C. Yonkofski, V.L. Freedman, and M.J. Truex. 2018. Draft Technical Impracticability Evaluation for Iodine-129 in Groundwater at Hanford: 200-UP-1 Operable Unit. PNNL-28057. Richland, WA: Pacific Northwest National Laboratory. Draft Technical Impracticability Evaluation for Iodine-129 in Groundwater at Hanford: 200-UP-1 Operable Unit
  • Rockhold M.L., X. Song, J.D. Tagestad, P.D. Thorne, G.D. Tartakovsky, and X. Chen. 2018. Sensitivity Analysis of Contaminant Transport from Vadose Zone Sources to Groundwater. PNNL-28065. Richland, WA: Pacific Northwest National Laboratory. Sensitivity Analysis of Contaminant Transport from Vadose Zone Sources to Groundwater
  • Stegen J.C., T.C. Johnson, J.K. Fredrickson, M.J. Wilkins, A.E. Konopka, W.C. Nelson, and E.V. Arntzen, et al. 2018. "Influences of organic carbon speciation on hyporheic corridor biogeochemistry and microbial ecology." Nature Communications 9, no. 1:Article No. 585. PNNL-SA-129526. doi:10.1038/s41467-018-02922-9
  • Szecsody J.E., M.J. Truex, B.D. Lee, C.E. Strickland, J.J. Moran, M. Snyder, and C.T. Resch, et al. 2018. Geochemical, Microbial, and Physical Characterization of 200-DV-1 Operable Unit B-Complex Cores from Boreholes C9552, C9487, and C9488 on the Hanford Site Central Plateau. PNNL-26266 Rev 1. Richland, WA: Pacific Northwest National Laboratory. Geochemical, Microbial, and Physical Characterization of 200-DV-1 Operable Unit B-Complex Cores from Boreholes C9552, C9487, and C9488 on the Hanford Site Central Plateau
  • Vernon C.R., J.S. Rice, N. Zuljevic, T.E. Seiple, M. Kintner-Meyer, C. Jin, and J. Olson, et al. 2018. "CERF – A Geospatial Model for Assessing Future Energy Production Technology Expansion Feasibility." Journal of Open Research Software. PNNL-SA-125186. doi:10.5334/jors.227
  • Vernon C.R., N. Zuljevic, J.S. Rice, T.E. Seiple, M. Kintner-Meyer, N. Voisin, and I.P. Kraucunas, et al. 2018. "CERF - A Geospatial Model for Assessing Future Energy Production Technology Expansion Feasibility." Journal of Open Research Software 6, no. 1:20. PNNL-SA-133523. doi:10.5334/jors.227
  • Vernon C.R., Y.L. Le Page, M. Chen, M. Huang, K.V. Calvin, I.P. Kraucunas, and C.J. Braun. 2018. "Demeter – A land use and land cover change disaggregation model." Journal of Open Research Software 6, no. 1:Article No. 15. PNNL-SA-131044. doi:10.5334/jors.208
  • Xu L., D. Naylor, Z. Dong, T. Simmons, G. Pierroz, K.K. Hixson, and Y. Kim, et al. 2018. "Drought delays development of the sorghum root microbiome and enriches for monoderm bacteria." Proceedings of the National Academy of Sciences of the United States of America 115, no. 8:E4284-E4293. PNNL-SA-131119. doi:10.1073/pnas.1717308115
  • Yonkofski C., D. Appriou, X. Song, J.L. Downs, C.D. Johnson, and V.C. Milbrath. 2018. Water Application for Dust Control in the Central Plateau: Impacts, Alternatives, and Work Strategies. PNNL-28061. Richland, WA: Pacific Northwest National Laboratory. Water Application for Dust Control in the Central Plateau: Impacts, Alternatives, and Work Strategies
  • Zhou T., J. Bao, M. Huang, Z. Hou, E.V. Arntzen, X. Song, and S.F. Harding, et al. 2018. "Riverbed Hydrologic Exchange Dynamics in a Large Regulated River Reach." Water Resources Research 54, no. 4:2715-2730. PNNL-SA-123666. doi:10.1002/2017WR020508

2017

  • Arntzen E.V., and R.P. Mueller. 2017. "Video-Based Electroshocking Platform to Identify Lamprey Ammocoete Habitat: Field Validation and New Discoveries in the Columbia River Basin." North American Journal of Fisheries Management 37, no. 3:676-681. PNNL-SA-122277. doi:10.1080/02755947.2017.1310152
  • Ashton N.K., S.A. Liss, R.W. Walker, R.S. Brown, C. Klassen, S. Backhouse, and P. Bates, et al. 2017. "How Low Can You Go? Determining a Size Threshold for Implantation of a New Acoustic Transmitter in Age-0 White Sturgeon." Northwest Science 91, no. 1:69-80. PNNL-SA-113031. doi:10.3955/046.091.0108
  • Baumgartner L.J., G. Thorncraft, O. Phonekhampeng, C.A. Boys, A. Navarro, W. Robinson, and R.S. Brown, et al. 2017. "High fluid shear strain causes injury in Silver shark: Preliminary implications for Mekong hydropower turbine design." Fisheries Management and Ecology 24, no. 3:193-198. PNNL-SA-115761. doi:10.1111/fme.12213
  • Bisht G., M. Huang, T. Zhou, X. Chen, H. Dai, G. Hammond, and W. Riley, et al. 2017. "Coupling a Three-Dimensional Subsurface Flow and Transport Model with a Land Surface Model to Simulate Stream-Aquifer-Land Interactions (CP v1.0)." Geoscientific Model Development 10, no. 12:4539-4562. PNNL-SA-123895. doi:10.5194/gmd-10-4539-2017
  • Burger J., M. Gochfeld, A.L. Bunn, J.L. Downs, C. Jeitner, T. Pittfield, and J.A. Salisbury, et al. 2017. "A Methodology to Evaluate Ecological Resources and Risk Using Two Case Studies at the Department of Energy’s Hanford Site." Environmental Management 59, no. 3:357-372. PNNL-SA-124297. doi:10.1007/s00267-016-0798-8
  • Colotelo A.H., A.E. Goldman, K.A. Wagner, R.S. Brown, Z. Deng, and M.C. Richmond. 2017. "A Comparison of Metrics to Evaluate the Effects of Hydro-facility Passage Stressors on Fish." Environmental Reviews 25, no. 1:1-11. PNNL-SA-115486. doi:10.1139/er-2016-0006
  • Deng Z., J.J. Martinez, H. Li, R.A. Harnish, C.M. Woodley, J.S. Hughes, and X. Li, et al. 2017. "Comparing the survival rate of juvenile Chinook salmon migrating through hydropower systems using injectable and surgical acoustic transmitters." Scientific Reports 7. PNNL-SA-113136. doi:10.1038/srep42999
  • Deng Z., J.P. Duncan, J.L. Arnold, T. Fu, J.J. Martinez, J. Lu, and P.S. Titzler, et al. 2017. "Evaluation of Boundary Dam Spillway Using an Autonomous Sensor Fish Device." Journal of Hydro-Environment Research 14. PNNL-SA-113125. doi:10.1016/j.jher.2016.10.004
  • Gao Z., E. Russell, J.E. Missik, M. Huang, X. Chen, C.E. Strickland, and R.E. Clayton, et al. 2017. "A novel approach to evaluate soil heat flux calculation: An analytical review of nine methods." Journal of Geophysical Research. D. (Atmospheres) 122, no. 13:6934-3649. PNNL-SA-127368. doi:10.1002/2017JD027160
  • Graham E.B., J.C. Stegen, A.R. Crump, C.T. Resch, S.J. Fansler, E.V. Arntzen, and D.W. Kennedy, et al. 2017. "Organic carbon thermodynamics elucidate spatiotemporal mechanisms governing hyporheic zone biogeochemical cycling." In Proceedings of the Subsurface Biogeochemical Research and Terrestrial Ecosystem Science Joint Meeting April 25-26, 2017, Potomac, Maryland. Washington, District Of Columbia:US Department of Energy, Office of Biological and Environmental Research. PNNL-SA-125130.
  • Graham E.B., M.M. Tfaily, A.R. Crump, A.E. Goldman, L.M. Bramer, E.V. Arntzen, and E.B. Romero, et al. 2017. "Carbon inputs from riparian vegetation limit oxidation of physically bound organic carbon via biochemical and thermodynamic processes." Journal of Geophysical Research. Biogeosciences 122, no. 12:3188-3205. PNNL-SA-125144. doi:10.1002/2017JG003967
  • Hou Z., W.C. Nelson, J.C. Stegen, C.J. Murray, E.V. Arntzen, A.R. Crump, and D.W. Kennedy, et al. 2017. "Geochemical and Microbial Community Attributes in Relation to Hyporheic Zone Geological Facies." Scientific Reports 7. PNNL-SA-121286. doi:10.1038/s41598-017-12275-w
  • Katipamula S., C.D. Corbin, J.N. Haack, H. Hao, W. Kim, D.J. Hostick, and B.A. Akyol, et al. 2017. Transactive Campus Energy Systems: Final Report. PNNL-26866. Richland, WA: Pacific Northwest National Laboratory. Transactive Campus Energy Systems: Final Report
  • Larche M.R., M.S. Prowant, P.J. Bruillard, T.J. Hagge, L.S. Fifield, M.S. Hughes, and X. Sun. 2017. "A Comparison of Different NDE Signal Processing Techniques Based on Waveform Entropies Applied to Long Fiber Graphite/Epoxy Plates." In Nondestructive Characterization and Monitoring of Advanced Materials, Aerospace, and Civil Infrastructure, March 25, 2017, Portland, Oregon, Proceedings of the SPIE, edited by HF Wu, AL Gyekenyesi, PJ Shull and T-Y Yu, 10169, Paper No. 101690T. Bellingham, Washington:SPIE. PNNL-SA-125214. doi:10.1117/12.2260490
  • Lee B.D., J.J. Moran, M.K. Nims, and D.L. Saunders. 2017. Letter Report: Stable Hydrogen and Oxygen Isotope Analysis of B-Complex Perched Water Samples. PNNL-26341. Richland, WA: Pacific Northwest National Laboratory. Letter Report: Stable Hydrogen and Oxygen Isotope Analysis of B-Complex Perched Water Samples
  • Li X., C.R. Vernon, M.I. Hejazi, R.P. Link, L. Feng, Y. Liu, and L.T. Rauchenstein. 2017. "Xanthos - A Global Hydrologic Model." Journal of Open Research Software 5, no. 1:21. PNNL-SA-126584. doi:10.5334/jors.181
  • McIntyre J.I., C.E. Aalseth, T.R. Alexander, H.O. Back, B.J. Bellgraph, T.W. Bowyer, and V.D. Chipman, et al. 2017. "Measurements of Argon-39 at theU20az Underground Nuclear Explosion Site." Journal of Environmental Radioactivity 178-179. PNNL-26326. doi:10.1016/j.jenvrad.2017.07.013
  • Miller B.L., E.V. Arntzen, A.E. Goldman, and M.C. Richmond. 2017. "Methane Ebullition in Temperate Hydropower Reservoirs and Implications for US Policy on Greenhouse Gas Emissions." Environmental Management 60, no. 4:615-629. PNNL-SA-115464. doi:10.1007/s00267-017-0909-1
  • Mueller R.P., J.M. Janak, S.A. Liss, R.S. Brown, Z. Deng, and R.A. Harnish. 2017. "Retention and Effects of Miniature Transmitters in Juvenile American Eels." Fisheries Research 195. PNNL-SA-120628. doi:10.1016/j.fishres.2017.06.017
  • Murcia Sanchez S.C., E. Lavoie, T.J. Linley, A. Devaraj, E.A. Ossa, and D.D. Arola. 2017. "The natural armors of fish: A comparison of the lamination pattern and structure of scales." JOURNAL OF THE MECHANICAL BEHAVIOR OF BIOMEDICAL MATERIALS, 73. PNNL-SA-129872. doi:10.1016/j.jmbbm.2016.09.025
  • Neeway J.J., R.M. Asmussen, B. Parruzot, E. Cordova, B.D. Williams, I.I. Leavy, and J.R. Stephenson, et al. 2017. FY2016 ILAW Glass Corrosion Testing with the Single-Pass Flow-Through Method. PNNL-26169; RPT-IGTP-013 Rev. 0.0. Richland, WA: Pacific Northwest National Laboratory. FY2016 ILAW Glass Corrosion Testing with the Single-Pass Flow-Through Method
  • Stern N., M.A. Ginder-Vogel, J.C. Stegen, E.V. Arntzen, D.W. Kennedy, B.R. Larget, and E.E. Roden. 2017. "Colonization Habitat Controls Biomass, Composition, and Metabolic Activity of Attached Microbial Communities in the Columbia River Hyporheic Corridor." Applied and Environmental Microbiology 83, no. 16:Article No. e00260-17. PNNL-SA-129379. doi:10.1128/AEM.00260-17
  • Tagestad J.D., K.B. Larson, and P.D. Royer. 2017. Analysis of Remotely Sensed Datasets to Detect Changes in Waste Sites. PNNL-27157. Richland, WA: Pacific Northwest National Laboratory. Analysis of Remotely Sensed Datasets to Detect Changes in Waste Sites
  • Truex M.J., J.E. Szecsody, N. Qafoku, C.E. Strickland, J.J. Moran, B.D. Lee, and M. Snyder, et al. 2017. Contaminant Attenuation and Transport Characterization of 200-DV-1 Operable Unit Sediment Samples. PNNL-26208; RPT-DVZ-AFRI-037. Richland, WA: Pacific Northwest National Laboratory. Contaminant Attenuation and Transport Characterization of 200-DV-1 Operable Unit Sediment Samples
  • Zhou T., M. Huang, J. Bao, Z. Hou, E.V. Arntzen, R.D. Mackley, and A.R. Crump, et al. 2017. "A New Approach to Quantify Shallow Water Hydrologic Exchanges in a Large Regulated River Reach." Water 9, no. 9:703. PNNL-SA-123562. doi:10.3390/w9090703

2016

  • Akyol B.A., C.H. Allwardt, Z.W. Beech, J.B. Chapman, J.N. Haack, S. Katipamula, and R.G. Lutes, et al. 2016. VOLTTRON 2016. PNNL-25499. Richland, WA: Pacific Northwest National Laboratory. VOLTTRON 2016
  • Bellgraph B.J., W.A. Perkins, M.C. Richmond, J.A. Serkowski, S.F. Harding, and R.A. Harnish. 2016. Lake Roosevelt White Sturgeon Modeling Support. PNNL-26056. Richland, WA: Pacific Northwest National Laboratory. Lake Roosevelt White Sturgeon Modeling Support
  • Boys C.A., W. Robinson, B. Miller, B. Pflugrath, L.J. Baumgartner, A. Navarro, and R.S. Brown, et al. 2016. "How low can they go when going with the flow? Tolerance of egg and larval fishes to rapid decompression." Biology Open 5, no. 6:786-793. PNNL-SA-112698. doi:10.1242/bio.017491
  • Boys C.A., W. Robinson, B. Miller, B.D. Pflugrath, L.J. Baumgartner, A. Navarro, and R.S. Brown, et al. 2016. "A piecewise regression approach for determining biologically relevant hydraulic thresholds for the protection of fish at river infrastructure." Journal of Fish Biology 88, no. 5:1677–1692. PNNL-SA-109599. doi:10.1111/jfb.12910
  • Burger J., M. Gochfeld, A.L. Bunn, J.L. Downs, C. Jeitner, T. Pittfield, and J.A. Salisbury. 2016. "Functional Remediation Components: A Conceptual Method of Evaluating the Effects of Remediation on Risks to Ecological Receptors." Journal of Toxicology and Environmental Health Part A 79, no. 21:957-968. PNNL-SA-119690. doi:10.1080/15287394.2016.1201026
  • Copping A.E., S.A. Breithaupt, J.M. Whiting, M.E. Grear, J.D. Tagestad, and G.A. Shelton. 2016. "Likelihood of a Marine Vessel Accident from Wind Energy Development in the Atlantic." Wind Energy 19, no. 9:1557-1566. PNNL-SA-108588. doi:10.1002/we.1935
  • Deng Z., A.H. Colotelo, R.S. Brown, and T.J. Carlson. 2016. "Environmental Issues Related to Conventional Hydropower." In Alternative Energy and Shale Gas Encyclopedia, edited by JH Lehr, J Keeley and TB Kingery. 404-409. Hoboken, New Jersey:John Wiley & Sons, Inc. PNNL-SA-82412. doi:10.1002/9781119066354.ch38
  • Deng Z., T.J. Carlson, G.R. Ploskey, R.S. Brown, G.E. Johnson, and A.H. Colotelo. 2016. "Experimental and numerical modeling tools for conventional hydropower systems." In Alternative Energy and Shale Gas Encyclopedia, edited by JH Lehr, J Keeley and TB Kingery. 448-464. Hoboken, New Jersey:John Wiley & Sons, Inc. PNNL-SA-90973. doi:10.1002/9781119066354.ch44
  • Diaz A.A., C.E. Chamberlin, M.K. Edwards, T.J. Hagge, M.S. Hughes, M.R. Larche, and R. Mathews, et al. 2016. FY16 Status of Immersion Phased Array Ultrasonic Probe Development and Performance Demonstration Results for Under Sodium Viewing. PNNL-25732. Richland, WA: Pacific Northwest National Laboratory. FY16 Status of Immersion Phased Array Ultrasonic Probe Development and Performance Demonstration Results for Under Sodium Viewing
  • Duncan J.P., M.R. Sackschewsky, H.T. Tilden, T.W. Moon, J.M. Barnett, B.G. Fritz, and G.A. Stoetzel, et al. 2016. Pacific Northwest National Laboratory Annual Site Environmental Report for Calendar Year 2015. PNNL-25738. Richland, WA: Pacific Northwest National Laboratory.
  • Fritz B.G., R.D. Mackley, and E.V. Arntzen. 2016. "Conducting Slug Tests in Mini-Piezometers." Ground Water 54, no. 2:291-295. PNNL-SA-105423. doi:10.1111/gwat.12335
  • Fu T., Z. Deng, J.P. Duncan, D. Zhou, T.J. Carlson, G.E. Johnson, and H. Hou. 2016. "Assessing Hydraulic Conditions through Francis turbines using an autonomous sensor device." Renewable Energy 99. PNNL-SA-113347. doi:10.1016/j.renene.2016.08.029
  • Geist D.R., A.H. Colotelo, T.J. Linley, K.A. Wagner, and A.L. Miracle. 2016. "Effects of a Novel Fish Transport System on the Health of Adult Fall Chinook Salmon." Journal of Fish and Wildlife Management 7, no. 2:347-358. PNNL-SA-113224. doi:10.3996/102015-JFWM-108
  • Li H., C. Tian, J. Lu, M.J. Myjak, J.J. Martinez, R.S. Brown, and Z. Deng. 2016. "An Energy Harvesting Underwater Acoustic Transmitter for Aquatic Animals." Scientific Reports 6. PNNL-SA-116757. doi:10.1038/srep33804
  • Linley T.J., E.J. Krogstad, M.K. Nims, and R.B. Langshaw. 2016. "Geochemical signatures in fin rays provide a nonlethal method to distinguish the natal rearing streams of endangered juvenile Chinook Salmon Oncorhynchus tshawytscha in the Wenatchee River, Washington." Fisheries Research 181. PNNL-SA-117248. doi:10.1016/j.fishres.2016.04.004
  • Linley T.J., E.J. Krogstad, R.P. Mueller, G.A. Gill, and B.K. Lasorsa. 2016. "Mercury concentrations in Pacific lamprey (Entosphenus tridentatus) and sediments in the Columbia River Basin." Environmental Toxicology and Chemistry 35, no. 10:2571-2576. PNNL-SA-116607. doi:10.1002/etc.3423
  • Liss S.A., R.S. Brown, K.A. Deters, R.W. Walker, Z. Deng, M.B. Eppard, and R.L. Townsend, et al. 2016. "Mortality, retention, growth, and wound healing in juvenile salmon injected with micro acoustic transmitters." Transactions of the American Fisheries Society 145, no. 5:1047-1058. PNNL-SA-115570. doi:10.1080/00028487.2016.1176955
  • Lu J., Z. Deng, H. Li, M.J. Myjak, J.J. Martinez, J. Xiao, and R.S. Brown, et al. 2016. "A SMALL LONG-LIFE ACOUSTIC TRANSMITTER FOR STUDYING THE BEHAVIOR OF AQUATIC ANIMALS." Review of Scientific Instruments 87, no. 11:114902. PNNL-SA-110558. doi:10.1063/1.4967941
  • Matzner S., A.R. Maxwell, K.D. Ham, R.D. Hytnen, and J. Horne. 2016. "Observing Ocean Ecosystems with Sonar." In MTS/IEEE Oceans 2016, September 19-23, 2016, Monterey, California. Piscataway, New Jersey:IEEE. PNNL-SA-120086. doi:10.1109/OCEANS.2016.7761014
  • Skalski J.R., M.A. Weiland, K.D. Ham, G.R. Ploskey, G.A. Mcmichael, A.H. Colotelo, and T.J. Carlson, et al. 2016. "Status After 5 Years of Survival Compliance Testing in the Federal Columbia River Power System (FCRPS)." North American Journal of Fisheries Management 36, no. 4:720-730. PNNL-SA-114788. doi:10.1080/02755947.2016.1165775
  • Snyder M., G.V. Last, J.R. Stephenson, and R.E. Clayton. 2016. Analytical Data Report for Sediment Samples Collected From 116-KE-3 and UPR-100-K-1; Boreholes C8796 and C8796. PNNL-25276. Richland, WA: Pacific Northwest National Laboratory. Analytical Data Report for Sediment Samples Collected From 116-KE-3 and UPR-100-K-1; Boreholes C8796 and C8796
  • Stegen J.C., J.K. Fredrickson, M.J. Wilkins, A. Konopka, W.C. Nelson, E.V. Arntzen, and W.B. Chrisler, et al. 2016. "Groundwater-Surface Water Mixing Shifts Ecological Assembly Processes and Stimulates Organic Carbon Turnover." Nature Communications 7. PNNL-SA-111962. doi:10.1038/ncomms11237
  • Tagestad J.D., M.L. Brooks, V.I. Cullinan, J.L. Downs, and R. McKinley. 2016. "Precipitation regime classification for the Mojave Desert: Implications for Fire Occurrence." Journal of Arid Environments 124. PNNL-SA-107574. doi:10.1016/j.jaridenv.2015.09.002
  • Walker R.W., N.K. Ashton, R.S. Brown, S.A. Liss, A.H. Colotelo, B. Do Vale Beirao, and R.L. Townsend, et al. 2016. "Effects of a Novel Acoustic Transmitter on Swimming Performance and Predator Avoidance of Juvenile Chinook Salmon: Determination of a Size Threshold." Fisheries Research 176. PNNL-SA-110565. doi:10.1016/j.fishres.2015.12.007

2015

  • Bellgraph B.J., D. Holecek, F.A. Goetz, J.S. Hughes, R.A. Harnish, J.A. Vazquez, and E.D. Green. 2015. Study Plan Alternatives to Evaluate Fish Entrainment at Albeni Falls Dam. PNNL-23950. Richland, WA: Pacific Northwest National Laboratory. Study Plan Alternatives to Evaluate Fish Entrainment at Albeni Falls Dam
  • Brown R.S., R.W. Walker, and J.R. Stephenson. 2015. A Preliminary Assessment of Barotrauma Injuries and Acclimation Studies for Three Fish Species. PNNL-24720. Richland, WA: Pacific Northwest National Laboratory. A Preliminary Assessment of Barotrauma Injuries and Acclimation Studies for Three Fish Species
  • Chen Y., P.V. Etingov, E.B. Fitzhenry, P. Sharma, T.B. Nguyen, Y.V. Makarov, and M.J. Rice, et al. 2015. "A Framework to Support the Fusion of Operation and Planning." In Proceedings of 9th IFAC Symposium on Control of Power and Energy Systems (CPES 2015), December 9-11, 2015, New Delhi, India. IFAC-PapersOnLine, 48, 427-432. Amsterdam:Elsevier. PNNL-SA-106843. doi:10.1016/j.ifacol.2015.12.416
  • Cullinan V.I., S. Matzner, and C.A. Duberstein. 2015. "Classification of Birds and Bats Using Flight Tracks." Journal of Field Ornithology 27. PNNL-SA-105515. doi:10.1016/j.ecoinf.2015.03.004
  • Deng Z., T.J. Carlson, H. Li, J. Xiao, M.J. Myjak, J. Lu, and J.J. Martinez, et al. 2015. "An injectable acoustic transmitter for juvenile salmon." Scientific Reports 5. PNNL-SA-104621. doi:10.1038/srep08111
  • Do Vale Beirao B., N. Castelo Branco Marciano, L. de Souza Dias, R. Carvalho Falco, E. Wander Dias, D. Leite Fabrino, and C. Barreira Martinez, et al. 2015. "Barotrauma em peixes em usinas hidrelétricas: ferramentas para o estudo." Boletim Sociedade Brasileira de Ictiologia 115. PNNL-SA-113247.
  • Duncan J.P., M.R. Sackschewsky, H.T. Tilden, J. Su-Coker, J.L. Mendez, M.Y. Ballinger, and B.G. Fritz, et al. 2015. Pacific Northwest National Laboratory Annual Site Environmental Report for Calendar Year 2014. PNNL-24668. Richland, WA: Pacific Northwest National Laboratory. Pacific Northwest National Laboratory Annual Site Environmental Report for Calendar Year 2014
  • Fowler K.M., A.H. Colotelo, J.L. Downs, K.D. Ham, J.W. Henderson, S.A. Montgomery, and C.R. Vernon, et al. 2015. Simplified Processing Method for Meter Data Analysis. PNNL-24331. Richland, WA: Pacific Northwest National Laboratory. Simplified Processing Method for Meter Data Analysis
  • Harnish R.A., A.H. Colotelo, X. Li, T. Fu, K.D. Ham, Z. Deng, and E.D. Green. 2015. Factors affecting route selection and survival of steelhead kelts at Snake River dams in 2012 and 2013. PNNL-24207. Richland, WA: Pacific Northwest National Laboratory. Factors affecting route selection and survival of steelhead kelts at Snake River dams in 2012 and 2013
  • Hejazi M.I., N. Voisin, L. Liu, L.M. Bramer, D.C. Fortin, J.E. Hathaway, and M. Huang, et al. 2015. "21st Century United States Emissions Mitigation Could Increase Water Stress more than the Climate Change it is Mitigating." Proceedings of the National Academy of Sciences of the United States of America 112, no. 34:10635-10640. PNNL-SA-105956. doi:10.1073/pnas.1421675112
  • Johnson G.E., G.R. Ploskey, N.K. Sather, and D.J. Teel. 2015. "Residence Times of Juvenile Salmon and Steelhead in Off-Channel Tidal Freshwater Habitats, Columbia River, USA." Canadian Journal of Fisheries and Aquatic Sciences 72, no. 5:684-696. PNNL-SA-101024. doi:10.1139/cjfas-2014-0085
  • Jung K., Z. Deng, J.J. Martinez, D.R. Geist, G.A. Mcmichael, J.R. Stephenson, and P. Graf. 2015. "Performance of an Acoustic Telemetry System in a Large Fishway." Animal Biotelemetry 3. PNWD-SA-10429. doi:10.1186/s40317-015-0052-9
  • Kim W., R.G. Lutes, S. Katipamula, J.N. Haack, B.J. Carpenter, B.A. Akyol, and K.E. Monson, et al. 2015. OpenEIS: Users Guide. PNNL-24065. Richland, WA: Pacific Northwest National Laboratory. OpenEIS: Users Guide
  • Larson K.B., J.D. Tagestad, C.J. Perkins, M.R. Oster, W.M. Warwick, and S.H. Geerlofs. 2015. A Technical and Economic Optimization Approach to Exploring Offshore Renewable Energy Development in Hawaii. PNNL-24639. Richland, WA: Pacific Northwest National Laboratory. A Technical and Economic Optimization Approach to Exploring Offshore Renewable Energy Development in Hawaii
  • Last G.V., M. Snyder, W. Um, J.R. Stephenson, I.I. Leavy, C.E. Strickland, and D.H. Bacon, et al. 2015. Technetium, Iodine, and Chromium Adsorption/Desorption Kd Values for Vadose Zone Pore Water, ILAW Glass, and Cast Stone Leachates Contacting an IDF Sand Sequence. PNNL-24683. Richland, WA: Pacific Northwest National Laboratory. Technetium, Iodine, and Chromium Adsorption/Desorption Kd Values for Vadose Zone Pore Water, ILAW Glass, and Cast Stone Leachates Contacting an IDF Sand Sequence
  • Li X., Z. Deng, J.J. Martinez, T. Fu, P.S. Titzler, J.S. Hughes, and M.A. Weiland, et al. 2015. "Three-Dimensional Tracking of Juvenile Salmon at Mid-Reach Location between Dams." Fisheries Research 167. PNWD-SA-10404. doi:10.1016/j.fishres.2015.01.018
  • Lutes R.G., C.C. Neubauer, J.N. Haack, B.J. Carpenter, K.E. Monson, C.H. Allwardt, and P. Sharma, et al. 2015. OpenEIS: Developer Guide. PNNL-24318. Richland, WA: Pacific Northwest National Laboratory. OpenEIS: Developer Guide
  • Mao J., S.A. Langley, Y. Huang, M. Hang, K.E. Bouchard, S.E. Celniker, and J.B. Brown, et al. 2015. "Identification of genetic factors that modify motor performance and body weight using Collaborative Cross mice." Scientific Reports 5. PNNL-SA-115429. doi:10.1038/srep16247
  • Matzner S., V.I. Cullinan, and C.A. Duberstein. 2015. "Two-dimensional thermal video analysis of offshore bird and bat flight." Ecological Informatics 30. PNNL-SA-109185. doi:10.1016/j.ecoinf.2015.09.001
  • Moser M.L., A.D. Jackson, M.C. Lucas, and R.P. Mueller. 2015. "Behavior and potential threats to survival of migrating lamprey ammocoetes and macrophthalmia." Reviews in Fish Biology and Fisheries 25, no. 2:103-116. PNNL-SA-105528. doi:10.1007/s11160-014-9372-8
  • Mueller R.P., C.L. Rakowski, W.A. Perkins, and M.C. Richmond. 2015. Assessment of Fluctuating Reservoir Elevations Using Hydraulic Models and Impacts to Larval Pacific Lamprey Rearing Habitat in the Bonneville Pool. PNNL-23876. Richland, WA: Pacific Northwest National Laboratory. Assessment of Fluctuating Reservoir Elevations Using Hydraulic Models and Impacts to Larval Pacific Lamprey Rearing Habitat in the Bonneville Pool
  • Neeway J.J., N. Qafoku, R.J. Serne, A.R. Lawter, J.R. Stephenson, W.W. Lukens, and J.H. Westsik. 2015. Evaluation of Technetium Getters to Improve the Performance of Cast Stone. PNNL-23667 Rev. 1;EMSP-RPT-026 Rev1. Richland, WA: Pacific Northwest National Laboratory. Evaluation of Technetium Getters to Improve the Performance of Cast Stone
  • Venteris E.R., J.D. Tagestad, J.L. Downs, and C.J. Murray. 2015. "Detection of Anomalous Crop Condition and Soil Variability Mappping Using a 26 Year Landsat Record and the Palmer Crop Moisture Index." International Journal of Applied Earth Observation and Geoinformation 39. PNWD-SA-10365. doi:10.1016/j.jag.2015.03.008

2014

  • Amezcua-Martinez F., and B.J. Bellgraph. 2014. Fisheries Management of Mexican and Central American Estuaries. Dordrecht:Springer Science+Business Media. PNNL-SA-100725.
  • Baumgartner L.J., Z. Deng, G. Thorncraft, C.A. Boys, R.S. Brown, D. Singhanouvong, and O. Phonekhampeng. 2014. "Perspective: Towards environmentally acceptable criteria for downstream fish passage through mini hydro and irrigation infrastructure in the Lower Mekong River Basin." Journal of Renewable and Sustainable Energy 6, no. 1:012301. PNNL-SA-98331. doi:10.1063/1.4867101
  • Bellgraph B.J., K.M. Carter, M.A. Chamness, T.K. Abel, T.J. Linley, and V.I. Cullinan. 2014. "Predation Susceptibility of Juvenile Fall Chinook Salmon Exposed to Sudden Temperature Changes and Slightly Supersaturated Dissolved Gas." In Snake River Fall Chinook Salmon Life History Investigations, 1/1/2012 - 12/31/2012 Annual Report, edited by KF Tiffan, et al. 61-90. Pasco, Washington:Bonneville Power Administration. PNNL-SA-96230.
  • Brown R.S., A.H. Colotelo, B.D. Pflugrath, C.A. Boys, L.J. Baumgartner, Z. Deng, and L.G. Silva, et al. 2014. "Understanding barotrauma in fish passing hydro structures: a global strategy for sustainable development of water resources." Fisheries 39, no. 3:108-122. PNNL-SA-90945. doi:10.1080/03632415.2014.883570
  • Choi E.Y., A.E. Flory, B.L. Lamarche, and M.A. Weiland. 2014. JSATS Detector Field Manual. PNNL-22135. Richland, WA: Pacific Northwest National Laboratory. JSATS Detector Field Manual
  • Colotelo A.H., K. Smokorowski, T. Haxton, and S.J. Cooke. 2014. "Comparative Evaluation of Four Presumptive Tests for Blood to Detect Epithelial Injury on Fish." Journal of Fish and Wildlife Management 5, no. 1:26-34. PNNL-SA-104909. doi:10.3996/012012-JFWM-007
  • Colotelo A.H., R.A. Harnish, B.W. Jones, A.C. Hanson, D.M. Trott, M.J. Greiner, and G.A. McMichael, et al. 2014. Passage Distribution and Federal Columbia River Power System Survival for Steelhead Kelts Tagged Above and at Lower Granite Dam, Year 2. PNNL-23051 FINAL. Richland, WA: Pacific Northwest National Laboratory. Passage Distribution and Federal Columbia River Power System Survival for Steelhead Kelts Tagged Above and at Lower Granite Dam, Year 2
  • Colotelo A.H., R.A. Harnish, B.W. Jones, A.C. Hanson, D.M. Trott, M.J. Greiner, and G.A. Mcmichael, et al. 2014. Passage Distribution and Federal Columbia River Power System Survival for Steelhead Kelts Tagged Above and at Lower Granite Dam, Year 2. PNNL-23051 Rev.1. Richland, WA: Pacific Northwest National Laboratory. Passage Distribution and Federal Columbia River Power System Survival for Steelhead Kelts Tagged Above and at Lower Granite Dam, Year 2
  • Cook K.V., R.S. Brown, Z. Deng, R.S. Klett, H. Li, A. Seaburg, and M.B. Eppard. 2014. "A comparison of implantation methods for large PIT tags or injectable acoustic transmitters in juvenile Chinook salmon." Fisheries Research 154. PNNL-SA-98032. doi:10.1016/j.fishres.2013.11.006
  • Deng Z., B. Southall, T.J. Carlson, J. Xu, J.J. Martinez, M.A. Weiland, and J.M. Ingraham. 2014. "200 kHz Commercial Sonar Systems Generate Lower Frequency Side Lobes Audible to Some Marine Mammals." PLoS One 9, no. 4:e95315. PNNL-SA-90862. doi:10.1371/journal.pone.0095315
  • Downs J.L. 2014. "Sagebrush Ecosystems Under Fire." Douglasia 38, no. 4) (Winter 2014. PNNL-SA-107376.
  • Duncan J.P., M.R. Sackschewsky, H.T. Tilden, J.M. Barnett, J. Su-Coker, M.Y. Ballinger, and B.G. Fritz, et al. 2014. Pacific Northwest National Laboratory Annual Site Environmental Report for Calendar Year 2013. PNNL-23523. Richland, WA: Pacific Northwest National Laboratory. Pacific Northwest National Laboratory Annual Site Environmental Report for Calendar Year 2013
  • Gibson T.D., S. Ciraci, P. Sharma, C.H. Allwardt, M.J. Rice, and B.A. Akyol. 2014. "An integrated security framework for GOSS power grid analytics platform." In 44th Annual IEEE/IFIP International Conference on Dependable Systems and Networks (DSN 2014), June 23-26, 2014, Atlanta, Georgia, 786-791. Piscataway, New Jersey:IEEE. PNNL-SA-102082.
  • Harnish R.A., A.H. Colotelo, X. Li, K.D. Ham, and Z. Deng. 2014. Factors Affecting Route Selection and Survival of Steelhead Kelts at Snake River Dams in 2012 and 2013. PNNL-23941. Richland, WA: Pacific Northwest National Laboratory. Factors Affecting Route Selection and Survival of Steelhead Kelts at Snake River Dams in 2012 and 2013
  • Harnish R.A., E.D. Green, C.R. Vernon, and G.A. Mcmichael. 2014. Ecological interactions between hatchery summer steelhead and wild Oncorhynchus mykiss in the Willamette River basin, 2014. PNNL-23891. Richland, WA: Pacific Northwest National Laboratory. Ecological interactions between hatchery summer steelhead and wild Oncorhynchus mykiss in the Willamette River basin, 2014
  • Harnish R.A., R. Sharma, G.A. McMichael, R.B. Langshaw, and T.N. Pearsons. 2014. "Effect of hydroelectric dam operations on the freshwater productivity of a Columbia River fall Chinook salmon population." Canadian Journal of Fisheries and Aquatic Sciences 71, no. 4:602-615. PNWD-SA-10123. doi:10.1139/cjfas-2013-0276
  • Hayes D.B., B.J. Bellgraph, B.M. Roth, D.D. Dauble, and R.P. Mueller. 2014. "Timing of Redd Construction by Fall Chinook Salmon in the Hanford Reach of the Columbia River." River Research and Applications 30, no. 9:1110-1119. PNWD-SA-10098. doi:10.1002/rra.2719
  • Ingraham J.M., Z. Deng, J.J. Martinez, B.A. Trumbo, R.P. Mueller, and M.A. Weiland. 2014. "Feasibility of Tracking Fish with Acoustic Transmitters in the Ice Harbor Dam Tailrace." Scientific Reports 4. PNWD-SA-10239. doi:10.1038/srep04090
  • Ingraham J.M., Z. Deng, X. Li, T. Fu, G.A. McMichael, and B.A. Trumbo. 2014. "A fast and accurate decoder for underwater acoustic telemetry." Review of Scientific Instruments 85, no. 7:074903. PNWD-SA-10345. doi:10.1063/1.4891041
  • Li X., Z. Deng, Y. Sun, J.J. Martinez, T. Fu, G.A. McMichael, and T.J. Carlson. 2014. "A 3D approximate maximum likelihood solver for localization of fish implanted with acoustic transmitters." Scientific Reports 4. PNWD-SA-10355. doi:10.1038/srep07215
  • Richmond M.C., J.A. Serkowski, L.L. Ebner, M. Sick, R.S. Brown, and T.J. Carlson. 2014. "Quantifying Barotrauma Risk to Juvenile Fish during Hydro-turbine Passage." Fisheries Research 154, no. 2014:152-164. PNNL-SA-94154. doi:10.1016/j.fishres.2014.01.007
  • Rodriguez-Preciado J.A., F. Amezcua-Martinez, B.J. Bellgraph, and J. Madrid-Vera. 2014. "Feeding habits and trophic level of the Panama grunt Pomadasys panamensis, an important bycatch species from the shrimp trawl fishery in the Gulf of California." Scientific World Journal 2014. PNNL-SA-88847. doi:10.1155/2014/864241
  • Skalski J.R., M.B. Eppard, G.R. Ploskey, M.A. Weiland, T.J. Carlson, and R.L. Townsend. 2014. "Assessment of Subyearling Chinook Salmon Survival through the Federal Hydropower Projects in the Main-Stem Columbia River." North American Journal of Fisheries Management 34, no. 4:741-752. PNNL-SA-100146. doi:10.1080/02755947.2014.910577
  • Trumbo B.A., M.L. Ahmann, J.F. Renholods, R.S. Brown, A.H. Colotelo, and Z. Deng. 2014. "Improving hydroturbine pressures to enhance salmon passage survival and recovery." Reviews in Fish Biology and Fisheries 24, no. 3:955-965. PNNL-SA-94447. doi:10.1007/s11160-013-9340-8
  • Vermeul V.R., C.E. Strickland, P.D. Thorne, B.N. Bjornstad, R.D. Mackley, M.E. Kelley, and E.C. Sullivan, et al. 2014. "FutureGen 2.0 Monitoring Program: An Overview of the Monitoring Approach and Technologies Selected for Implementation." Energy Procedia 63. PNWD-SA-10395. doi:10.1016/j.egypro.2014.11.438
  • Widder S.H., M.A. Chamness, J.M. Petersen, B.C. Singer, R.L. Maddalena, and H. Destaillats. 2014. Pilot Implementation of a Field Study Design to Evaluate the Impact of Source Control Measures on Indoor Air Quality in High Performance Homes. PNNL-23789. Richland, WA: Pacific Northwest National Laboratory. Pilot Implementation of a Field Study Design to Evaluate the Impact of Source Control Measures on Indoor Air Quality in High Performance Homes

2013

  • Arntzen E.V., B.L. Miller, A.C. O'Toole, S.E. Niehus, and M.C. Richmond. 2013. Evaluating greenhouse gas emissions from hydropower complexes on large rivers in Eastern Washington. PNNL-22297. Richland, WA: Pacific Northwest National Laboratory. Evaluating greenhouse gas emissions from hydropower complexes on large rivers in Eastern Washington
  • Brown R.S., E.W. Oldenburg, A. Seaburg, K.V. Cook, J.R. Skalski, M.B. Eppard, and K.A. Deters. 2013. "Survival of Seaward-Migrating PIT and Acoustic-Tagged Juvenile Chinook Salmon in the Snake and Columbia Rivers: An Evaluation of Length-Specific Tagging Effects." Animal Biotelemetry 1. PNNL-SA-80631. doi:10.1186/2050-3385-1-8
  • Brown R.S., K.A. Deters, K.V. Cook, and M.B. Eppard. 2013. "A comparison of single-suture and double-suture incision closures in seaward-migrating juvenile Chinook salmon implanted with acoustic transmitters: implications for research in river basins containing hydropower structures." Animal Biotelemetry 1. PNNL-SA-92173. doi:10.1186/2050-3385-1-10
  • Brown R.S., K.V. Cook, B.D. Pflugrath, L.L. Rozeboom, R.C. Johnson, J. McLellan, and T.J. Linley, et al. 2013. "Vulnerability of larval and juvenile white sturgeon to barotrauma: can they handle the pressure?." Conservation Physiology 1, no. 1:Article No. cot019. PNNL-SA-96109. doi:10.1093/conphys/cot019
  • Brown R.S., Z. Deng, K.V. Cook, B.D. Pflugrath, X. Li, T. Fu, and J.J. Martinez, et al. 2013. "A field evaluation of an external and neutrally buoyant acoustic transmitter for juvenile salmon: implications for estimating hydroturbine passage survival." PLoS One 8, no. 10:e77744. PNWD-SA-10136. doi:10.1371/journal.pone.0077744
  • Bryson A.J., C.M. Woodley, R.K. Karls, K.D. Hall, M.A. Weiland, Z. Deng, and T.J. Carlson, et al. 2013. "Comparison of 180-degree and 90-degree needle rotation to reduce wound size in PIT-injected juvenile Chinook salmon." Fisheries Research 143. PNNL-SA-91825. doi:10.1016/j.fishres.2013.02.011
  • Colotelo A.H., G.D. Raby, C.T. Hasler, T. Haxton, K. Smokorowski, G. Blouin-Demers, and S.J. Cooke. 2013. "Northern pike bycatch in an inland commercial hoop net fishery: effects of water temperature and net tending frequency on injury, physiology, and survival." Fisheries Research 137. PNNL-SA-90688. doi:10.1016/j.fishres.2012.08.019
  • Cooke S.J., V.M. Nguyen, K.J. Murchie, J.D. Thiem, M.R. Donaldson, S.G. Hinch, and R.S. Brown, et al. 2013. "To tag or not to tag: animal welfare, conservation and stakeholder considerations in fish tracking studies that use electronic tags." Journal of International Wildlife Law & Policy 16, no. 4:352-374. PNNL-SA-100278. doi:10.1080/13880292.2013.805075
  • Copping A.E., S.A. Breithaupt, J.D. Tagestad, J.M. Whiting, M.E. Grear, and G.A. Shelton. 2013. Risk Assessment for Marine Vessel Traffic and Wind Energy Development in the Atlantic. PNNL-23453. Richland, WA: Pacific Northwest National Laboratory. Risk Assessment for Marine Vessel Traffic and Wind Energy Development in the Atlantic
  • Duncan J.P. 2013. Characterization of Fish Passage Conditions through the Fish Weir and Turbine Unit 1 at Foster Dam, Oregon, Using Sensor Fish, 2012. PNNL-22236. Richland, WA: Pacific Northwest National Laboratory. Characterization of Fish Passage Conditions through the Fish Weir and Turbine Unit 1 at Foster Dam, Oregon, Using Sensor Fish, 2012
  • Duncan J.P., M.Y. Ballinger, B.G. Fritz, H.T. Tilden, G.A. Stoetzel, J.M. Barnett, and J. Su-Coker, et al. 2013. Pacific Northwest National Laboratory Annual Site Environmental Report for Calendar Year 2012. PNNL-22691. Richland, WA: Pacific Northwest National Laboratory. Pacific Northwest National Laboratory Annual Site Environmental Report for Calendar Year 2012
  • Durham R.E., and J.M. Becker. 2013. L-325 Sagebrush Habitat Mitigation Project: Final Compensation Area Monitoring Report. PNNL-22809. Richland, WA: Pacific Northwest National Laboratory. L-325 Sagebrush Habitat Mitigation Project: Final Compensation Area Monitoring Report
  • Flory A.E., B.L. Lamarche, and M.A. Weiland. 2013. JSATS Decoder Software Manual. PNNL-22134 . Richland, WA: Pacific Northwest National Laboratory. JSATS Decoder Software Manual
  • Geist D.R., T.J. Linley, V.I. Cullinan, and Z. Deng. 2013. "The effects of total dissolved gas on chum salmon fry survival, growth, gas bubble disease, and seawater tolerance." North American Journal of Fisheries Management 33, no. 1:200-215. PNNL-SA-88149. doi:10.1080/02755947.2012.750634
  • Greif R., K. Steimle, R.S. Brown, and D. Gessler. 2013. "Cost-Effective Passage Design for High-Head Hydro Facilities." Hydro Review Sept. 2013. PNWD-SA-10181.
  • Hughes J.S., G.E. Johnson, G.R. Ploskey, M.J. Hennen, E.S. Fischer, and S.A. Zimmerman. 2013. Optimization of Hydroacoustic Equipment Deployment at Foster Dam, 2013. PNNL-22359. Richland, WA: Pacific Northwest National Laboratory. Optimization of Hydroacoustic Equipment Deployment at Foster Dam, 2013
  • Hughes J.S., M.A. Weiland, C.M. Woodley, G.R. Ploskey, S.M. Carpenter, M.J. Hennen, and E.S. Fischer, et al. 2013. Survival and Passage of Yearling and Subyearling Chinook Salmon and Juvenile Steelhead at McNary Dam, 2012. PNNL-22788 FINAL. Richland, WA: Pacific Northwest National Laboratory. Survival and Passage of Yearling and Subyearling Chinook Salmon and Juvenile Steelhead at McNary Dam, 2012
  • Johnson G.E., F. Khan, J.R. Skalski, and B.A. Klatte. 2013. "Sluiceway Operations to Pass Juvenile Salmonids at The Dalles Dam, Columbia River, USA." North American Journal of Fisheries Management 33, no. 5:1000-1012. PNNL-SA-87100. doi:10.1080/02755947.2013.822441
  • Khan F., I.M. Royer, G.E. Johnson, and S.C. Tackley. 2013. "Sluiceway Operations for Adult Steelhead Downstream Passage at The Dalles Dam, Columbia River, USA." North American Journal of Fisheries Management 33, no. 5:1013-1023. PNNL-SA-87099. doi:10.1080/02755947.2013.793629
  • Klett K.J., C. Torgersen, J. Henning, and C.J. Murray. 2013. "Spatial consistency of Chinook salmon redd distribution within and among years in the Cowlitz River, Washington." North American Journal of Fisheries Management 33, no. 3:508-518. PNNL-SA-94487. doi:10.1080/02755947.2013.778924
  • McMichael G.A., A.C. O'Toole, R.A. Harnish, and D.M. Trott. 2013. "Juvenile salmonid migratory behavior at the mouth of the Columbia River and within the plume." Animal Biotelemetry 1. PNNL-SA-94109. doi:10.1186/2050-3385-1-14
  • Petrocchi R., D.K. Craig, J. Bond, D.M. Trott, and X. Yu. 2013. Health Code Number (HCN) Development Procedure. PNNL-22828. Richland, WA: Pacific Northwest National Laboratory. Health Code Number (HCN) Development Procedure
  • Ploskey G.R., G. Batten, A.W. Cushing, J.A. Kim, G.E. Johnson, J.R. Skalski, and R.L. Townsend, et al. 2013. Survival and Passage of Juvenile Chinook Salmon and Steelhead Passing through Bonneville Dam, 2011. PNNL-22178 Final. Richland, WA: Pacific Northwest National Laboratory. Survival and Passage of Juvenile Chinook Salmon and Steelhead Passing through Bonneville Dam, 2011.
  • Rayamajhi B., G.R. Ploskey, C.M. Woodley, M.A. Weiland, D.M. Faber, J.A. Kim, and A.H. Colotelo, et al. 2013. Route-Specific Passage and Survival of Steelhead Kelts at The Dalles and Bonneville Dams, 2012 - Final Report. PNNL-22461 Rev. 1. Richland, WA: Pacific Northwest National Laboratory. Route-Specific Passage and Survival of Steelhead Kelts at The Dalles and Bonneville Dams, 2012 - Final Report
  • Rice M.J., Z. Huang, Y. Chen, C.H. Allwardt, and P.S. Mackey. 2013. "Alleviating Contingency Violations through Visual Analytics and Suggested Actions." In IEEE Power and Energy Society General Meeting (PES 2013), July 21-25, 2013, Vancouver, BC. Piscataway, New Jersey:IEEE. PNNL-SA-92477. doi:10.1109/PESMG.2013.6672738
  • Skalski J.R., R.L. Townsend, A. Seaburg, G.R. Ploskey, M.A. Weiland, J.S. Hughes, and C.M. Woodley, et al. 2013. Compliance Monitoring of Subyearling Chinook Salmon Smolt Survival and Passage at Bonneville Dam, Summer 2012. PNNL-22188. Richland, WA: Pacific Northwest National Laboratory. Compliance Monitoring of Subyearling Chinook Salmon Smolt Survival and Passage at Bonneville Dam, Summer 2012
  • Skalski J.R., R.L. Townsend, A. Seaburg, G.R. Ploskey, M.A. Weiland, J.S. Hughes, and C.M. Woodley, et al. 2013. Compliance Monitoring of Subyearling Chinook Salmon Survival and Passage at The Dalles Dam, Summer 2012. PNNL-22195. Richland, WA: Pacific Northwest National Laboratory. Compliance Monitoring of Subyearling Chinook Salmon Survival and Passage at The Dalles Dam, Summer 2012
  • Skalski J.R., R.L. Townsend, A. Seaburg, M.A. Weiland, C.M. Woodley, J.S. Hughes, and G.R. Ploskey, et al. 2013. Compliance Monitoring of Yearling and Subyearling Chinook Salmon and Juvenile Steelhead Survival and Passage at John Day Dam, 2012. PNNL-22152. Richland, WA: Pacific Northwest National Laboratory. Compliance Monitoring of Yearling and Subyearling Chinook Salmon and Juvenile Steelhead Survival and Passage at John Day Dam, 2012
  • Thorncraft G., L.J. Baumgartner, C.A. Boys, and R.S. Brown. 2013. "Merging hydraulics with biology." International Water Power & Dam Construction 65, no. 1:42-43. PNNL-SA-93692.
  • Vernon C.R., E.V. Arntzen, M.C. Richmond, R.A. McManamay, T.P. Hanrahan, and C.L. Rakowski. 2013. GIS Framework for Large River Geomorphic Classification to Aid in the Evaluation of Flow-Ecology Relationships. PNNL-22296. Richland, WA: Pacific Northwest National Laboratory. GIS Framework for Large River Geomorphic Classification to Aid in the Evaluation of Flow-Ecology Relationships
  • Walker R.W., L.M. Markillie, A.H. Colotelo, D.R. Geist, M.E. Gay, C.M. Woodley, and M.B. Eppard, et al. 2013. "Ultraviolet radiation as disinfection for fish surgical tools." Animal Biotelemetry 1. PNNL-SA-86919. doi:10.1186/2050-3385-1-4
  • Walker R.W., L.M. Markillie, A.H. Colotelo, M.E. Gay, C.M. Woodley, and R.S. Brown. 2013. The Efficacy of Ultraviolet Radiation for Sterilizing Tools Used for Surgically Implanting Transmitters into Fish. PNNL-21126. Richland, WA: Pacific Northwest National Laboratory. The Efficacy of Ultraviolet Radiation for Sterilizing Tools Used for Surgically Implanting Transmitters into Fish
  • Walker R.W., R.S. Brown, K.A. Deters, M.B. Eppard, and S.J. Cooke. 2013. "Does UV disinfection compromise sutures? An evaluation of tissue response and suture retention in salmon surgically implanted with transmitters." Fisheries Research 147. PNNL-SA-92197. doi:10.1016/j.fishres.2013.04.010
  • Weiland M.A., C.M. Woodley, G.R. Ploskey, J.S. Hughes, J.A. Kim, Z. Deng, and T. Fu, et al. 2013. Acoustic Telemetry Evaluation of Juvenile Salmonid Passage and Survival at John Day Dam, 2010. PNNL-22177. Richland, WA: Pacific Northwest National Laboratory. Acoustic Telemetry Evaluation of Juvenile Salmonid Passage and Survival at John Day Dam, 2010
  • Weiland M.A., C.M. Woodley, G.R. Ploskey, J.S. Hughes, M.J. Hennen, J.A. Kim, and Z. Deng, et al. 2013. Acoustic Telemetry Evaluation of Juvenile Salmonid Passage and Survival at John Day Dam, 2011. PNNL-22266. Richland, WA: Pacific Northwest National Laboratory. Acoustic Telemetry Evaluation of Juvenile Salmonid Passage and Survival at John Day Dam, 2011
  • Woodley C.M., E.S. Fischer, K.A. Wagner, M.A. Weiland, M.B. Eppard, and T.J. Carlson. 2013. "COMPLIANCE STUDIES: WHAT ABOUT THE FISH?." In HydroVision International Conference, July 23-26, 2014, Denver, Colorado. Tulsa, Oklahoma:HydroVision International. PNNL-SA-95784.

2012

  • Becker J.M., and M.A. Chamness. 2012. 2011 Annual Ecological Survey: Pacific Northwest National Laboratory Site. PNNL-21164. Richland, WA: Pacific Northwest National Laboratory. 2011 Annual Ecological Survey: Pacific Northwest National Laboratory Site
  • Brown R.S., B.D. Pflugrath, A.H. Colotelo, C.J. Brauner, T.J. Carlson, Z. Deng, and A. Seaburg. 2012. "Pathways of Barotrauma in Juvenile Salmonids Exposed to Simulated Hydroturbine Passage: Boyle’s Law vs. Henry’s Law." Fisheries Research 121-122, no. 1:43-50. PNNL-SA-83903. doi:10.1016/j.fishres.2012.01.006
  • Brown R.S., B.D. Pflugrath, T.J. Carlson, and Z. Deng. 2012. "The Effect of an Externally Attached Neutrally Buoyant Transmitter on Mortal Injury during Simulated Hydroturbine Passage." Journal of Renewable and Sustainable Energy 4, no. 1:Article No. 013107. PNNL-SA-83175. doi:10.1063/1.3682062
  • Brown R.S., M.L. Ahmann, B.A. Trumbo, and J. Foust. 2012. "Fish Protection: Cooperative research advances fish-friendly turbine design." Hydro Review 31, no. 8. PNNL-SA-90422.
  • Brown R.S., T.J. Carlson, A.J. Gingerich, J.R. Stephenson, B.D. Pflugrath, A.E. Welch, and M. Langeslay, et al. 2012. "Quantifying mortal injury of juvenile Chinook salmon exposed to simulated hydro-turbine passage." Transactions of the American Fisheries Society 141, no. 1:147-157. PNNL-SA-76832. doi:10.1080/00028487.2011.650274
  • Carlson T.J., R.S. Brown, J.R. Stephenson, B.D. Pflugrath, A.H. Colotelo, A.J. Gingerich, and P.L. Benjamin, et al. 2012. "The Influence of Tag Presence on the Mortality of Juvenile Chinook Salmon Exposed to Simulated Hydroturbine Passage: Implications for Survival Estimates and Management of Hydroelectric Facilities." North American Journal of Fisheries Management 32, no. 2:249-261. PNNL-SA-76806. doi:10.1080/02755947.2012.661384
  • Chamness M.A., K. Winsor, and S.D. Unwin. 2012. A Summary of Coupled, Uncoupled, and Hybrid Tectonic Models for the Yakima Fold Belt--Topical Report. PNNL-17500. Richland, WA: Pacific Northwest National Laboratory. A Summary of Coupled, Uncoupled, and Hybrid Tectonic Models for the Yakima Fold Belt--Topical Report
  • Colotelo A.H., B.D. Pflugrath, R.S. Brown, C.J. Brauner, R.P. Mueller, T.J. Carlson, and Z. Deng, et al. 2012. "The effect of rapid and sustained decompression on barotrauma in juvenile brook lamprey and Pacific lamprey: implications for passage at hydroelectric facilities." Fisheries Research 129–130. PNNL-SA-85601. doi:10.1016/j.fishres.2012.06.001
  • Davies G.M., J.D. Bakker, E. Dettweiler-Robinson, P.W. Dunwiddie, S.A. Hall, J.L. Downs, and J. Evans. 2012. "Trajectories of change in sagebrush steppe vegetation communities in relation to multiple wildfires." Ecological Applications 22, no. 5:1562-1577. PNNL-SA-86059. doi:10.1890/10-2089.1
  • Deng Z., J.J. Martinez, A.H. Colotelo, T.K. Abel, A.P. LeBarge, R.S. Brown, and B.D. Pflugrath, et al. 2012. "Development of External and Neutrally Buoyant Acoustic Transmitters for Juvenile Salmon Turbine Passage Evaluation." Fisheries Research 113, no. 1:94–105. PNNL-SA-79155. doi:10.1016/j.fishres.2011.08.018
  • Deters K.A., R.S. Brown, J.W. Boyd, M.B. Eppard, and A. Seaburg. 2012. "Optimal Suturing Technique and Number of Sutures for Surgical Implantation of Acoustic Transmitters in Juvenile Salmonids." Transactions of the American Fisheries Society 141. PNNL-SA-76729. doi:10.1080/00028487.2011.638594
  • Duberstein C.A., S. Matzner, V.I. Cullinan, D.J. Virden, J.R. Myers, and A.R. Maxwell. 2012. Automated Thermal Image Processing for Detection and Classification of Birds and Bats - FY2012 Annual Report. PNNL-21911. Richland, WA: Pacific Northwest National Laboratory. Automated Thermal Image Processing for Detection and Classification of Birds and Bats - FY2012 Annual Report
  • Duncan J.P., B.G. Fritz, H.T. Tilden, G.A. Stoetzel, A. Stegen, J.M. Barnett, and J. Su-Coker, et al. 2012. Pacific Northwest National Laboratory Site Environmental Report for Calendar Year 2011. PNNL-21787. Richland, WA: Pacific Northwest National Laboratory. Pacific Northwest National Laboratory Site Environmental Report for Calendar Year 2011
  • Gingerich A.J., B.J. Bellgraph, R.S. Brown, N.T. Tavan, Z. Deng, and J. Brown. 2012. "Quantifying reception strength and omnidirectionality of underwater radio telemetry antennas: advances and applications for fisheries research." Fisheries Research 121-122. PNWD-SA-9571. doi:10.1016/j.fishres.2012.01.003
  • Hanrahan T.P., and K.B. Larson. 2012. Methods for Quantifying Shallow-Water Habitat Availability in the Missouri River. PNNL-21193. Richland, WA: Pacific Northwest National Laboratory. Methods for Quantifying Shallow-Water Habitat Availability in the Missouri River
  • Hanrahan T.P., T.E. Seiple, and J.W. Lettrick. 2012. PNNL River Habitat Model User Guide. PNNL-21048. Richland, WA: Pacific Northwest National Laboratory. PNNL River Habitat Model User Guide
  • Harnish R.A., G.E. Johnson, G.A. McMichael, M.S. Hughes, and B.D. Ebberts. 2012. "Effect of Migration Pathway on Travel Time and Survival of Acoustic-Tagged Juvenile Salmonids in the Columbia River Estuary." Transactions of the American Fisheries Society 141, no. 2:507-519. PNNL-SA-70629. doi:10.1080/00028487.2012.670576
  • Janak J.M., R.S. Brown, A.H. Colotelo, B.D. Pflugrath, J.R. Stephenson, Z. Deng, and T.J. Carlson, et al. 2012. "The Effects of Neutrally Buoyant, Externally Attached Transmitters on Swimming Performance and Predator Avoidance of Juvenile Chinook Salmon." Transactions of the American Fisheries Society 141, no. 5:1424-1432. PNNL-SA-82928. doi:10.1080/00028487.2012.688915
  • Johnson G.E., H.L. Diefenderfer, R.M. Thom, G.C. Roegner, B.D. Ebberts, J.R. Skalski, and A.B. Borde, et al. 2012. Evaluation of Cumulative Ecosystem Response to Restoration Projects in the Lower Columbia River and Estuary, 2010. PNNL-20296. Richland, WA: Pacific Northwest National Laboratory. Evaluation of Cumulative Ecosystem Response to Restoration Projects in the Lower Columbia River and Estuary, 2010
  • Johnson G.E., M.J. Hennen, S.A. Zimmerman, G. Batten, S.M. Carpenter, Z. Deng, and T. Fu, et al. 2012. Survival and Passage of Yearling Chinook Salmon and Steelhead at The Dalles Dam, Spring 2011 - FINAL REPORT. PNNL-21826. Richland, WA: Pacific Northwest National Laboratory. Survival and Passage of Yearling Chinook Salmon and Steelhead at The Dalles Dam, Spring 2011 - FINAL REPORT
  • Johnson G.E., W.H. Pearson, S.L. Southard, and R.P. Mueller. 2012. "Upstream Movement of Juvenile Coho Salmon in Relation to Environmental Conditions in a Culvert Test Bed." Transactions of the American Fisheries Society 141, no. 6:1520-1531. PNWD-SA-8455. doi:10.1080/00028487.2012.699013
  • Khan F., and I.M. Royer. 2012. Hydroacoustic Evaluation of Overwintering Summer Steelhead Fallback and Kelt Passage at The Dalles Dam Turbines, Early Spring 2011. PNNL-20431 FINAL. Richland, WA: Pacific Northwest National Laboratory. Hydroacoustic Evaluation of Overwintering Summer Steelhead Fallback and Kelt Passage at The Dalles Dam Turbines, Early Spring 2011
  • Khan F., G.E. Johnson, I.M. Royer, J.S. Hughes, E.S. Fischer, D.M. Trott, and G.R. Ploskey. 2012. Hydroacoustic Evaluation of Juvenile Salmonid Passage and Distribution at Lookout Point Dam, 2010. PNNL-20362 FINAL. Richland, WA: Pacific Northwest National Laboratory. Hydroacoustic Evaluation of Juvenile Salmonid Passage and Distribution at Lookout Point Dam, 2010
  • Khan F., G.E. Johnson, I.M. Royer, N.R. Phillips, J.S. Hughes, E.S. Fischer, and K.D. Ham, et al. 2012. Acoustic Imaging Evaluation of Juvenile Salmonid Behavior in the Immediate Forebay of the Water Temperature Control Tower at Cougar Dam, 2010. PNNL-20625 FINAL. Richland, WA: Pacific Northwest National Laboratory. Acoustic Imaging Evaluation of Juvenile Salmonid Behavior in the Immediate Forebay of the Water Temperature Control Tower at Cougar Dam, 2010
  • Khan F., I.M. Royer, G.E. Johnson, and K.D. Ham. 2012. Hydroacoustic Evaluation of Juvenile Salmonid Passage and Distribution at Detroit Dam, 2011. PNNL-21577 FINAL. Richland, WA: Pacific Northwest National Laboratory. Hydroacoustic Evaluation of Juvenile Salmonid Passage and Distribution at Detroit Dam, 2011
  • Mueller R.P., E.V. Arntzen, M.A. Nabelek, B.L. Miller, K.J. Klett, and R.A. Harnish. 2012. "Laboratory testing of a modified electroshocking system designed for deepwater juvenile lamprey sampling." Transactions of the American Fisheries Society 141, no. 3:841-845. PNWD-SA-9512. doi:10.1080/00028487.2012.675908
  • Pflugrath B.D., R.S. Brown, and T.J. Carlson. 2012. "Maximum Neutral Buoyancy Depth of Juvenile Chinook Salmon: Implications for Survival during Hydroturbine Passage." Transactions of the American Fisheries Society 141, no. 2:520-525. PNNL-SA-80256. doi:10.1080/00028487.2012.670187
  • Ploskey G.R., D.M. Faber, M.A. Weiland, and T.J. Carlson. 2012. Monitoring of Juvenile Yearling Chinook Salmon and Steelhead Survival and Passage at Bonneville Dam, Spring 2010. PNNL-19898 Rev. 1. Richland, WA: Pacific Northwest National Laboratory. Monitoring of Juvenile Yearling Chinook Salmon and Steelhead Survival and Passage at Bonneville Dam, Spring 2010
  • Ploskey G.R., M.A. Weiland, and T.J. Carlson. 2012. Monitoring of Subyearling Chinook Salmon Survival and Passage at Bonneville Dam, Summer 2010. PNNL-20095 Rev. 1. Richland, WA: Pacific Northwest National Laboratory. Monitoring of Subyearling Chinook Salmon Survival and Passage at Bonneville Dam, Summer 2010
  • Ploskey G.R., M.A. Weiland, and T.J. Carlson. 2012. Route-Specific Passage Proportions and Survival Rates for Fish Passing through John Day Dam, The Dalles Dam, and Bonneville Dam in 2010 and 2011. PNNL-21442. Richland, WA: Pacific Northwest National Laboratory. Route-Specific Passage Proportions and Survival Rates for Fish Passing through John Day Dam, The Dalles Dam, and Bonneville Dam in 2010 and 2011
  • Ploskey G.R., M.A. Weiland, J.S. Hughes, C.M. Woodley, Z. Deng, T.J. Carlson, and J.A. Kim, et al. 2012. Survival and Passage of Juvenile Chinook Salmon and Steelhead Passing Through Bonneville Dam, 2010. PNNL-20835 Rev. 1. Richland, WA: Pacific Northwest National Laboratory. Survival and Passage of Juvenile Chinook Salmon and Steelhead Passing Through Bonneville Dam, 2010
  • Ploskey G.R., S.A. Zimmerman, M.J. Hennen, G.W. Batten, and T.D. Mitchell. 2012. Hydroacoustic Estimates of Fish Density Distributions in Cougar Reservoir, 2011. PNNL-21430. Richland, WA: Pacific Northwest National Laboratory. Hydroacoustic Estimates of Fish Density Distributions in Cougar Reservoir, 2011
  • Skalski J.R., R.L. Townsend, A. Seaburg, G.E. Johnson, G.R. Ploskey, and T.J. Carlson. 2012. Compliance Monitoring of Juvenile Yearling Chinook Salmon and Steelhead Survival and Passage at The Dales Dam, Spring 2011. PNNL-21124. Richland, WA: Pacific Northwest National Laboratory. Compliance Monitoring of Juvenile Yearling Chinook Salmon and Steelhead Survival and Passage at The Dales Dam, Spring 2011
  • Skalski J.R., R.L. Townsend, A. Seaburg, G.E. Johnson, G.R. Ploskey, and T.J. Carlson. 2012. Compliance Monitoring of Juvenile Yearling Chinook Salmon and Steelhead Survival and Passage at The Dalles Dam, Spring 2011. PNNL-21124 Rev 1. Richland, WA: Pacific Northwest National Laboratory. Compliance Monitoring of Juvenile Yearling Chinook Salmon and Steelhead Survival and Passage at The Dalles Dam, Spring 2011
  • Skalski J.R., R.L. Townsend, A. Seaburg, G.R. Ploskey, and T.J. Carlson. 2012. Compliance Monitoring of Yearling Chinook Salmon and Juvenile Steelhead Survival and Passage at Bonneville Dam, Spring 2011. PNNL-21175 Rev 1. Richland, WA: Pacific Northwest National Laboratory. Compliance Monitoring of Yearling Chinook Salmon and Juvenile Steelhead Survival and Passage at Bonneville Dam, Spring 2011
  • Skalski J.R., R.L. Townsend, A. Seaburg, G.R. Ploskey, and T.J. Carlson. 2012. Compliance Monitoring of Yearling Chinook Salmon and Juvenile Steelhead Survival and Passage at Bonneville Dam, Spring 2011. PNNL-21175. Richland, WA: Pacific Northwest National Laboratory. Compliance Monitoring of Yearling Chinook Salmon and Juvenile Steelhead Survival and Passage at Bonneville Dam, Spring 2011
  • Skalski J.R., R.L. Townsend, A. Seaburg, M.A. Weiland, C.M. Woodley, J.S. Hughes, and T.J. Carlson. 2012. Compliance Monitoring of Yearling Chinook Salmon and Juvenile Steelhead Survival and Passage at John Day Dam, Spring 2011. PNNL-21176 Rev 1. Richland, WA: Pacific Northwest National Laboratory. Compliance Monitoring of Yearling Chinook Salmon and Juvenile Steelhead Survival and Passage at John Day Dam, Spring 2011
  • Skalski J.R., R.L. Townsend, A. Seaburg, M.A. Weiland, C.M. Woodley, J.S. Hughes, and T.J. Carlson. 2012. Compliance Monitoring of Yearling Chinook Salmon and Juvenile Steelhead Survival and Passage at John Day Dam, Spring 2011. PNNL-21176. Richland, WA: Pacific Northwest National Laboratory. Compliance Monitoring of Yearling Chinook Salmon and Juvenile Steelhead Survival and Passage at John Day Dam, Spring 2011
  • Trott D.M., J. LePage, and V. Hebert. 2012. "Assessing Natural Isothiocyanate Air Emissions after Field Incorporation of Mustard Cover Crop." Bulletin of Environmental Contamination and Toxicology 88, no. 3:482-485. PNNL-21081. doi:10.1007/s00128-011-0506-6
  • Weiland M.A., G.R. Ploskey, J.S. Hughes, C.M. Woodley, Z. Deng, T.J. Carlson, and J.R. Skalski, et al. 2012. Monitoring of Juvenile Subyearling Chinook Salmon Survival and Passage at John Day Dam, Summer 2010. PNNL-22014. Richland, WA: Pacific Northwest National Laboratory. Monitoring of Juvenile Subyearling Chinook Salmon Survival and Passage at John Day Dam, Summer 2010
  • Weiland M.A., G.R. Ploskey, J.S. Hughes, C.M. Woodley, Z. Deng, T.J. Carlson, and J.R. Skalski, et al. 2012. Monitoring of Juvenile Yearling Chinook Salmon and Steelhead Survival and Passage at John Day Dam, Spring 2010. PNNL-22015. Richland, WA: Pacific Northwest National Laboratory. Monitoring of Juvenile Yearling Chinook Salmon and Steelhead Survival and Passage at John Day Dam, Spring 2010
  • Woodley C.M., A.J. Bryson, S.M. Carpenter, K.M. Knox, M.E. Gay, and K.A. Wagner. 2012. Performance Assessment of Bi-Directional Knotless Tissue-Closure Device in Juvenile Chinook Salmon Surgically Implanted with Acoustic Transmitters, 2010 - Final Report. PNNL-21699. Richland, WA: Pacific Northwest National Laboratory. Performance Assessment of Bi-Directional Knotless Tissue-Closure Device in Juvenile Chinook Salmon Surgically Implanted with Acoustic Transmitters, 2010 - Final Report
  • Xu J., Z. Deng, J.J. Martinez, T.J. Carlson, J.R. Myers, and M.A. Weiland. 2012. "Broadband Acoustic Environment at a Tidal Energy Site in Puget Sound." Marine Technology Society Journal 46, no. 2:65-73. PNNL-SA-83076. doi:10.4031/MTSJ.46.2.1

2011

  • Adams S.M., and K.D. Ham. 2011. "Application of Biochemical and Physiological Indicators for Assessing Recovery of Fish Populations in a Disturbed Stream." Environmental Management 47, no. 6:1047-1063. PNNL-SA-80424.
  • Boyd J.W., K.A. Deters, R.S. Brown, and M.B. Eppard. 2011. "Efficacy of Single-Suture Incision Closures in Tagged Juvenile Chinook Salmon Exposed to Simulated Turbine Passage." Transactions of the American Fisheries Society 140, no. 5:1186-1192. PNNL-SA-83075. doi:10.1080/00028487.2011.616827
  • Brown R.S., M.B. Eppard, K.J. Murchie, J.L. Nielsen, and S.J. Cooke. 2011. "An introduction to the practical and ethical perspectives on the need to advance and standardize the intracoelomic surgical implantation of electronic tags in fish." Reviews in Fish Biology and Fisheries (2011) 21. PNNL-SA-76622. doi:10.1007/s11160-010-9183-5
  • Brown R.S., W.A. Hubert, and S. Daly. 2011. "A Primer on Winter, Ice, and Fish: What Fisheries Biologists Should Know about Winter Ice Processes and Stream-dwelling Fishes." Fisheries 36, no. 1:8-26. PNWD-SA-8940.
  • Carter K.M., C.M. Woodley, and R.S. Brown. 2011. "A review of tricaine methanesulfonate for anesthesia of fish." Reviews in Fish Biology and Fisheries 21, no. 1:51-59. PNNL-SA-72945. doi:10.1007/s11160-010-9188-0
  • Chamness M.A., C. Perry, J.L. Downs, and S.D. Powell. 2011. 2010 Ecological Survey of the Pacific Northwest National Laboratory Site. PNNL-20199. Richland, WA: Pacific Northwest National Laboratory. 2010 Ecological Survey of the Pacific Northwest National Laboratory Site
  • Colotelo A.H., and S.J. Cooke. 2011. "Evaluation of Common Angling-Induced Sources of Epithelial Damage for Popular Freshwater Sport Fish using Fluorescein." Fisheries Research 109, no. 2-3:217-224. PNNL-SA-76637.
  • Cooke S.J., C.M. Woodley, M.B. Eppard, R.S. Brown, and J.L. Nielsen. 2011. "Advancing the surgical implantation of electronic tags in fish: a gap analysis and research agenda based on a review of trends in intracoelomic tagging effects studies." Reviews in Fish Biology and Fisheries 21, no. 1:127-151. PNNL-SA-76652. doi:10.1007/s11160-010-9193-3
  • Cooke S.J., G.N. Wagner, R.S. Brown, and K.A. Deters. 2011. "Training considerations for the intracoelomic implantation of electronic tags in fish with a summary of common surgical errors." Reviews in Fish Biology and Fisheries 21, no. 1:11-24. PNNL-SA-76634. doi:10.1007/s11160-010-9184-4
  • Deng Z., M.A. Weiland, T. Fu, T.A. Seim, B.L. Lamarche, E.Y. Choi, and T.J. Carlson, et al. 2011. "A Cabled Acoustic Telemetry System for Detecting and Tracking Juvenile Salmon: Part 2. Three-Dimensional Tracking and Passage Outcomes." Sensors 11, no. 6:5661-5676. PNNL-SA-78690. doi:10.3390/s110605661
  • Deng Z., R.S. Brown, T.J. Carlson, J.J. Martinez, A.H. Colotelo, B.D. Pflugrath, and T.K. Abel, et al. 2011. "Development of external and neutrally buoyant acoustic transmitters for turbine passage evaluation." In EPRI-DOE Conference on Environmentally-Enhanced Hydro Turbines, May 19-20, 2011, Washington DC, 155-164. Palo Alto, California:EPRI. PNNL-SA-79460. doi:10.2172/1057387
  • Deng Z., T.J. Carlson, D.D. Dauble, and G.R. Ploskey. 2011. "Fish Passage Assessment of an Advanced Hydropower Turbine and Conventional Turbine Using Blade-strike Modeling." Energies 4, no. 1:57-67. PNNL-SA-75408. doi:10.3390/en4010057
  • Deng Z., T.J. Carlson, J. Xu, J.J. Martinez, M.A. Weiland, R.P. Mueller, and J.R. Myers, et al. 2011. "Design and operation specifications of an active monitoring system for detecting southern resident killer whales." In OCEANS 2011, September 19-22, 2011, Kona, Hawaii. Piscataway, New Jersey:IEEE. PNNL-SA-81594.
  • Downs J.L., R.E. Durham, and K.B. Larson. 2011. Revegetation Plan for Areas of the Fitzner-Eberhardt Arid Lands Ecology Reserve Affected by Decommissioning of Buildings and Infrastructure and Debris Clean-up Actions. PNNL-19879. Richland, WA: Pacific Northwest National Laboratory. Revegetation Plan for Areas of the Fitzner-Eberhardt Arid Lands Ecology Reserve Affected by Decommissioning of Buildings and Infrastructure and Debris Clean-up Actions
  • Downs J.L., S.O. Link, L.L. Rozeboom, R.E. Durham, R.O. Cruz, and S.A. Mckee. 2011. Survey of Revegetated Areas on the Fitzner/Eberhardt Arid Lands Ecology Reserve: Status and Initial Monitoring Results. PNNL-20793. Richland, WA: Pacific Northwest National Laboratory. Survey of Revegetated Areas on the Fitzner/Eberhardt Arid Lands Ecology Reserve: Status and Initial Monitoring Results
  • Duberstein C.A. 2011. Characterization and Monitoring Data for Evaluating Constructed Emergent Sandbar Habitat in the Missouri River Mainstem 2004-2009. PNNL-20097. Richland, WA: Pacific Northwest National Laboratory. Characterization and Monitoring Data for Evaluating Constructed Emergent Sandbar Habitat in the Missouri River Mainstem 2004-2009
  • Duberstein C.A., J.D. Tagestad, and K.B. Larson. 2011. Assessment of Technologies Used to Characterize Wildlife Populations in the Offshore Environment. PNNL-20984. Richland, WA: Pacific Northwest National Laboratory. Assessment of Technologies Used to Characterize Wildlife Populations in the Offshore Environment
  • Duncan J.P. 2011. Characterization of Fish Passage Conditions through a Francis Turbine and Regulating Outlet at Cougar Dam, Oregon, Using Sensor Fish, 2009–2010. PNNL-20408. Richland, WA: Pacific Northwest National Laboratory. Characterization of Fish Passage Conditions through a Francis Turbine and Regulating Outlet at Cougar Dam, Oregon, Using Sensor Fish, 2009–2010
  • Duncan J.P. 2011. Sensor Fish Characterization of Fish Passage Conditions through John Day Dam Spillbay 20 with a Modified Flow Deflector. PNNL-20359. Richland, WA: Pacific Northwest National Laboratory. Sensor Fish Characterization of Fish Passage Conditions through John Day Dam Spillbay 20 with a Modified Flow Deflector
  • Duncan J.P., and T.J. Carlson. 2011. Characterization of Fish Passage Conditions through a Francis Turbine, Spillway, and Regulating Outlet at Detroit Dam, Oregon, Using Sensor Fish, 2009. PNNL-20365. Richland, WA: Pacific Northwest National Laboratory. Characterization of Fish Passage Conditions through a Francis Turbine, Spillway, and Regulating Outlet at Detroit Dam, Oregon, Using Sensor Fish, 2009
  • Faber D.M., G.R. Ploskey, M.A. Weiland, Z. Deng, J.S. Hughes, J.A. Kim, and T. Fu, et al. 2011. Evaluation of Behavioral Guidance Structure on Juvenile Salmonid Passage and Survival at Bonneville Dam in 2009. PNNL-20338. Richland, WA: Pacific Northwest National Laboratory. Evaluation of Behavioral Guidance Structure on Juvenile Salmonid Passage and Survival at Bonneville Dam in 2009
  • Geist D.R., Z. Deng, R.P. Mueller, V.I. Cullinan, S.R. Brink, and J.A. Chandler. 2011. "The effect of fluctuating temperatures and ration levels on the growth of juvenile Snake River fall Chinook salmon." Transactions of the American Fisheries Society 140, no. 1:190-200. PNWD-SA-8841.
  • Gutzeit J.L., E.P. Kennedy, B.N. Bjornstad, M.R. Sackschewsky, J.J. Sharpe, R. DeMaris, and M. Venno, et al. 2011. Cultural Resources Review for Closure of the nonradioactive Dangerous Waste Landfill and Solid Waste Landfill in the 600 Area, Hanford Site, Benton County, Washington, HCRC# 2010-600-018R. PNNL-20162. Richland, WA: Pacific Northwest National Laboratory. Cultural Resources Review for Closure of the nonradioactive Dangerous Waste Landfill and Solid Waste Landfill in the 600 Area, Hanford Site, Benton County, Washington, HCRC# 2010-600-018R
  • Harnish R.A., A.H. Colotelo, and R.S. Brown. 2011. "A review of polymer-based water conditioners for reduction of handling-related injury." Reviews in Fish Biology and Fisheries 21, no. 1:43-49. PNNL-SA-76621. doi:10.1007/s11160-010-9187-1
  • Hasler C.T., A.H. Colotelo, T. Rapp, E. Jamieson, K. Bellehumeur, R. Arlinghaus, and S.J. Cooke. 2011. "Opinions of fisheries researchers, managers, and anglers towards recreational fishing issues: an exploratory analysis for North America." American Fisheries Society Symposium 75. PNNL-SA-76190.
  • Hughes J.S., Z. Deng, M.A. Weiland, J.J. Martinez, and Y. Yuan. 2011. "Water Velocity Measurements on a Vertical Barrier Screen at the Bonneville Dam Second Powerhouse." Energies 4, no. 11:2038-2048. PNNL-SA-81351. doi:10.3390/en4112038
  • Johnson G.E., A. Storch, J.R. Skalski, A.J. Bryson, C. Mallette, A.B. Borde, and E. Van Dyke, et al. 2011. Ecology of Juvenile Salmon in Shallow Tidal Freshwater Habitats of the Lower Columbia River, 2007–2010. PNNL-20083. Richland, WA: Pacific Northwest National Laboratory. Ecology of Juvenile Salmon in Shallow Tidal Freshwater Habitats of the Lower Columbia River, 2007–2010
  • Johnson G.E., J.R. Skalski, T.J. Carlson, G.R. Ploskey, M.A. Weiland, Z. Deng, and E.S. Fischer, et al. 2011. Survival and Passage of Yearling and Subyearling Chinook Salmon and Steelhead at The Dalles Dam, 2010. PNNL-20626. Richland, WA: Pacific Northwest National Laboratory. Survival and Passage of Yearling and Subyearling Chinook Salmon and Steelhead at The Dalles Dam, 2010
  • Martinez J.J., J.R. Myers, T.J. Carlson, Z. Deng, J.S. Rohrer, K.A. Caviggia, and C.M. Woodley, et al. 2011. "Design and implementation of an underwater sound recording device." Sensors 11, no. 9:8519-8535. PNNL-SA-80867. doi:10.3390/s110908519
  • McMichael G.A., J.R. Skalski, and K.A. Deters. 2011. "Survival of Juvenile Chinook Salmon during Barge Transport." North American Journal of Fisheries Management 31, no. 6:1187 - 1196. PNNL-SA-78271.
  • McMichael G.A., R.A. Harnish, J.R. Skalski, K.A. Deters, K.D. Ham, R.L. Townsend, and P.S. Titzler, et al. 2011. Migratory Behavior and Survival of Juvenile Salmonids in the Lower Columbia River, Estuary, and Plume in 2010. PNNL-20443. Richland, WA: Pacific Northwest National Laboratory. Migratory Behavior and Survival of Juvenile Salmonids in the Lower Columbia River, Estuary, and Plume in 2010
  • McMichael G.A., R.A. Harnish, M.A. Weiland, Z. Deng, and M.B. Eppard. 2011. "Fish Passage: A New Tool to Investigate Fish Movement: JSATS." Hydro Review 30. PNNL-SA-78282.
  • Mueller R.P., B.L. Tiller, M.D. Bleich, G. Turner, and I.D. Welch. 2011. Assessment of the Species Composition, Densities, and Distribution of Native Freshwater Mussels along the Benton County Shoreline of the Hanford Reach, Columbia River, 2004. PNNL-19933. Richland, WA: Pacific Northwest National Laboratory. Assessment of the Species Composition, Densities, and Distribution of Native Freshwater Mussels along the Benton County Shoreline of the Hanford Reach, Columbia River, 2004
  • Murray C.J., D.R. Geist, E.V. Arntzen, Y. Bott, and M.A. Nabelek. 2011. Development of a Conceptual Chum Salmon Emergence Model for Ives Island. PNNL-20035. Richland, WA: Pacific Northwest National Laboratory. Development of a Conceptual Chum Salmon Emergence Model for Ives Island
  • Oldenburg E.W., A.H. Colotelo, R.S. Brown, and M.B. Eppard. 2011. "Holding of juvenile salmonids for surgical implantation of electronic tags: a review and recommendations." Reviews in Fish Biology and Fisheries 21. PNNL-SA-72532. doi:10.1007/s11160-010-9186-2
  • Panther J.L., R.S. Brown, G. Gaulke, K.A. Deters, C.M. Woodley, and M.B. Eppard. 2011. "Influence of Incision Location on Transmitter Loss, Healing, Survival, Growth, and Suture Retention of Juvenile Chinook Salmon." Transactions of the American Fisheries Society 140, no. 6:1492-1503. PNNL-SA-84610. doi:10.1080/00028487.2011.637003
  • Ploskey G.R., D.M. Faber, M.A. Weiland, and T.J. Carlson. 2011. Monitoring of Juvenile Yearling Chinook Salmon and Steelhead Survival and Passage at Bonneville Dam, Spring 2010. PNNL-19898. Richland, WA: Pacific Northwest National Laboratory. Monitoring of Juvenile Yearling Chinook Salmon and Steelhead Survival and Passage at Bonneville Dam, Spring 2010
  • Ploskey G.R., M.A. Weiland, and T.J. Carlson. 2011. Monitoring of Subyearling Chinook Salmon Survival and Passage at Bonneville Dam, Summer 2010. PNNL-20095. Richland, WA: Pacific Northwest National Laboratory. Monitoring of Subyearling Chinook Salmon Survival and Passage at Bonneville Dam, Summer 2010
  • Ploskey G.R., M.A. Weiland, J.S. Hughes, C.M. Woodley, Z. Deng, T.J. Carlson, and J.A. Kim, et al. 2011. Survival and Passage of Juvenile Chinook Salmon and Steelhead Passing through Bonneville Dam, 2010. PNNL-20835. Richland, WA: Pacific Northwest National Laboratory. Survival and Passage of Juvenile Chinook Salmon and Steelhead Passing through Bonneville Dam, 2010
  • Poston T.M., J.P. Duncan, and R.L. Dirkes. 2011. Hanford Site Environmental Report for Calendar Year 2010. PNNL-20548. Richland, WA: Pacific Northwest National Laboratory. Hanford Site Environmental Report for Calendar Year 2010
  • Raby G.D., A.H. Colotelo, G. Blouin-Demers, and S.J. Cooke. 2011. "Freshwater Commercial Bycatch: an Understated Conservation Problem." BioScience 61, no. 4:271-280. PNNL-SA-74602. doi:10.1525/bio.2011.61.4.7
  • Roesijadi G., A.M. Coleman, C. Judd, F.B. Van Cleve, R.M. Thom, K.E. Buenau, and J.D. Tagestad, et al. 2011. Macroalgae Analysis A National GIS-based Analysis of Macroalgae Production Potential Summary Report and Project Plan. PNNL-21087. Richland, WA: Pacific Northwest National Laboratory. Macroalgae Analysis A National GIS-based Analysis of Macroalgae Production Potential Summary Report and Project Plan
  • Simmons M., T.M. Poston, B.G. Fritz, and L.E. Bisping. 2011. Radionuclide Concentrations in Terrestrial Vegetation and Soil Samples On and Around the Hanford Site, 1971 Through 2008. PNNL-20577. Richland, WA: Pacific Northwest National Laboratory. Radionuclide Concentrations in Terrestrial Vegetation and Soil Samples On and Around the Hanford Site, 1971 Through 2008
  • Wagner G.N., S.J. Cooke, R.S. Brown, and K.A. Deters. 2011. "Surgical implantation techniques for electronic tags in fish." Reviews in Fish Biology and Fisheries 21, no. 1:71-81. PNNL-SA-76633. doi:10.1007/s11160-010-9191-5
  • Weber M.J., M.J. Hennen, and M.L. Brown. 2011. "Simulated population responses of common carp to commercial exploitation." North American Journal of Fisheries Management 31, no. 2:269-279. PNNL-SA-77050. doi:10.1080/02755947.2011.574923
  • Weiland M.A., G.R. Ploskey, J.S. Hughes, Z. Deng, T. Fu, J.A. Kim, and G.E. Johnson, et al. 2011. Acoustic Telemetry Evaluation of Juvenile Salmonid Passage and Survival Proportions at John Day Dam, 2009. PNNL-20766. Richland, WA: Pacific Northwest National Laboratory. Acoustic Telemetry Evaluation of Juvenile Salmonid Passage and Survival Proportions at John Day Dam, 2009
  • Weiland M.A., Z. Deng, T.A. Seim, B.L. Lamarche, E.Y. Choi, T. Fu, and T.J. Carlson, et al. 2011. "A cabled acoustic telemetry system for detecting and tracking juvenile salmon: Part 1. Engineering design and instrumentation." Sensors 11, no. 6:5645-5660. PNNL-SA-78490. doi:10.3390/s110605645
  • Woodley C.M., S.M. Carpenter, K.M. Carter, K.A. Wagner, I.M. Royer, K.M. Knox, and J.A. Kim, et al. 2011. Surgically Implanted JSATS Micro-Acoustic Transmitters Effects on Juvenile Chinook Salmon and Steelhead Tag Expulsion and Survival, 2010. PNNL-20857. Richland, WA: Pacific Northwest National Laboratory. Surgically Implanted JSATS Micro-Acoustic Transmitters Effects on Juvenile Chinook Salmon and Steelhead Tag Expulsion and Survival, 2010
  • Xu J., Z. Deng, J.J. Martinez, T.J. Carlson, J.R. Myers, M.A. Weiland, and M.E. Jones. 2011. "Acoustic Environment of Admiralty Inlet: Broadband Noise Measurements." In OCEANS 2011, September 19-22, 2011, Kona, Hawaii. Piscataway, New Jersey:IEEE. PNNL-SA-81421.

2010

  • Bellgraph B.J., G.A. McMichael, R.P. Mueller, and J.L. Monroe. 2010. "Behavioural response of juvenile Chinook salmon Oncorhynchus tshawytscha during a sudden temperature increase and implications for survival." Journal of Thermal Biology 35, no. 1:6-10. PNNL-SA-65005.
  • Boyd J.W., C.S. Guy, T. Horton, and S.A. Leathe. 2010. "Effects of Catch-and-Release Angling on Salmonids at Elevated Water Temperatures." North American Journal of Fisheries Management 30, no. 4:898-907. PNNL-SA-67517. doi:10.1577/M09-107.1
  • Boyd J.W., E.W. Oldenburg, and G.A. McMichael. 2010. "Color Photographic Index of Fall Chinook Salmon Embryonic Development and Accumulated Thermal Units." PLoS One 5, no. 7:Article No. e11877. PNWD-SA-8881. doi:10.1371/journal.pone.0011877
  • Brown R.S., C.R. Duguay, R.P. Mueller, L. Moulton, P.J. Doucette, and J.D. Tagestad. 2010. "Use of Synthetic Aperture Radar (SAR) to Identify and Characterize Overwintering Areas of Fish in Ice-Covered Arctic RIvers: A Demonstration with Broad Whitefish and their Habitats in the Sagavanirktok River, Alaska." Transactions of the American Fisheries Society 139. PNNL-SA-74135.
  • Brown R.S., R.A. Harnish, K.M. Carter, J.W. Boyd, K.A. Deters, and M.B. Eppard. 2010. "An evaluation of the maximum tag burden for implantation of acoustic transmitters in juvenile Chinook salmon." North American Journal of Fisheries Management 30. PNNL-SA-65472.
  • Chen Y., Z. Huang, P.C. Wong, P.S. Mackey, C.H. Allwardt, J. Ma, and F.L. Greitzer. 2010. "An Advanced Decision Support Tool for Electricity Infrastructure Operations." In Critical Infrastructure Protection IV, IFIP Advances in Information and Communication Technology, edited by T. Moore and S. Shenoi, 342, 245-260. New York, New York:Springer. PNNL-SA-70214. doi:10.1007/978-3-642-16806-2_17
  • Coleman A.M., D.L. Ward, K.B. Larson, and J.W. Lettrick. 2010. Development of a high-resolution bathymetry dataset for the Columbia River through the Hanford Reach. PNNL-19878. Richland, WA: Pacific Northwest National Laboratory. Development of a high-resolution bathymetry dataset for the Columbia River through the Hanford Reach
  • Deng Z., M.A. Weiland, T.J. Carlson, and M.B. Eppard. 2010. "Design and Instrumentation of a Measurement and Calibration System for an Acoustic Telemetry System." Sensors 10, no. 4:3090-3099. PNNL-SA-71221. doi:10.3390/s100403090
  • Deng Z., R.P. Mueller, M.C. Richmond, and G.E. Johnson. 2010. "Injury and mortality of juvenile salmon entrained in a submerged jet entering still water." North American Journal of Fisheries Management 30, no. 3:623-628. PNNL-SA-63135.
  • Deng Z., T.J. Carlson, J.P. Duncan, M.C. Richmond, and D.D. Dauble. 2010. "Use of an Autonomous Sensor to Evaluate the Biological Performance of the Advanced Turbine at Wanapum Dam." Journal of Renewable and Sustainable Energy 2, no. 5:053104. PNNL-SA-72709. doi:10.1063/1.3501336
  • Deters K.A., R.S. Brown, K.M. Carter, J.W. Boyd, M.B. Eppard, and A. Seaburg. 2010. "Performance Assessment of Suture Type, Water Temperature, and Surgeon Skill in Juvenile Chinook Salmon Surgically Implanted with Acoustic Transmitters." Transactions of the American Fisheries Society 139, no. 3:888-899. PNNL-SA-65378.
  • Deters K.A., R.S. Brown, K.M. Carter, J.W. Boyd, M.B. Eppard, and A. Seaburg. 2010. "Performance Assessment of Suture Type, Water Temperature, and Surgeon Skill in Juvenile Chinook Salmon Surgically Implanted with Acoustic Transmitters." Transactions of the American Fisheries Society 139, no. 3:888-899. PNNL-SA-76288.
  • Duncan J.P. 2010. Evaluation of Fish Passage Conditions for Juvenile Salmonids Using Sensor Fish at Detroit Dam, Oregon. PNNL-18747. Richland, WA: Pacific Northwest National Laboratory. Evaluation of Fish Passage Conditions for Juvenile Salmonids Using Sensor Fish at Detroit Dam, Oregon
  • Duncan J.P., T.M. Poston, and R.L. Dirkes. 2010. Summary of the Hanford Site Environmental Report for Calendar Year 2009. PNNL-19455 -SUM. Richland, WA: Pacific Northwest National Laboratory. Summary of the Hanford Site Environmental Report for Calendar Year 2009
  • Faber D.M., G.R. Ploskey, M.A. Weiland, Z. Deng, J.S. Hughes, R.L. McComas, and J. Kim, et al. 2010. Evaluation of a Behavioral Guidance Structure at Bonneville Dam Second Powerhouse including Passage Survival of Juvenile Salmon and Steelhead using Acoustic Telemetry, 2008. PNNL-18753. Richland, WA: Pacific Northwest National Laboratory. Evaluation of a Behavioral Guidance Structure at Bonneville Dam Second Powerhouse including Passage Survival of Juvenile Salmon and Steelhead using Acoustic Telemetry, 2008
  • Geist D.R., Z. Deng, R.P. Mueller, S.R. Brink, and J.A. Chandler. 2010. "Survival and growth of juvenile Snake River fall Chinook salmon exposed to constant and fluctuating temperatures." Transactions of the American Fisheries Society 139, no. 1:92-107. PNWD-SA-8458. doi:10.1577/T09-003.1
  • Gingerich A.J., D.P. Philipp, and C.D. Suski. 2010. "Effects of nutritional status on metabolic rate, exercise and recovery in a freshwater fish." Journal of Comparative Physiology B: Biochemical, Systemic, and Environmental Physiology 180, no. 3:371-384. PNNL-SA-74363. doi:10.1007/s00360-009-0419-4
  • Ham K.D. 2010. "Corps uses simulations to design salmon passage improvements." Hydro Review 29, no. 6. PNWD-SA-8765.
  • Johnson G.E., F. Khan, G.R. Ploskey, J.S. Hughes, and E.S. Fischer. 2010. Optimization of Hydroacoustic Equipment Deployments at Lookout Point and Cougar Dams, Willamette Valley Project, 2010. PNNL-19293. Richland, WA: Pacific Northwest National Laboratory. Optimization of Hydroacoustic Equipment Deployments at Lookout Point and Cougar Dams, Willamette Valley Project, 2010
  • Khan F., G.E. Johnson, and M.A. Weiland. 2010. Hydroacoustic Evaluation of Overwintering Summer Steelhead Fallback and Kelt Passage at The Dalles Dam, 2009-2010. PNNL-19615. Richland, WA: Pacific Northwest National Laboratory. Hydroacoustic Evaluation of Overwintering Summer Steelhead Fallback and Kelt Passage at The Dalles Dam, 2009-2010
  • Mackley R.D., F.A. Spane, T.C. Pulsipher, and C.H. Allwardt. 2010. Guide to using Multiple Regression in Excel (MRCX v.1.1) for Removal of River Stage Effects from Well Water Levels. PNNL-19775 Rev. 1. Richland, WA: Pacific Northwest National Laboratory. Guide to using Multiple Regression in Excel (MRCX v.1.1) for Removal of River Stage Effects from Well Water Levels
  • Matzner S., A.R. Maxwell, J.R. Myers, K.A. Caviggia, J.L. Elster, M.G. Foley, and M.E. Jones, et al. 2010. "Small Vessel Contribution to Underwater Noise." In Oceans 2010 MTS/IEEE Seattle. Piscataway, Nj:Institute of Electrical and Electronics Engineers (IEEE). PNNL-SA-74289. doi:10.1109/OCEANS.2010.5663818
  • McMichael G.A., M.B. Eppard, T.J. Carlson, J.A. Carter, B.D. Ebberts, R.S. Brown, and M.A. Weiland, et al. 2010. "The Juvenile Salmon Acoustic Telemetry System; A New Tool." Fisheries 35, no. 1:9-22. PNWD-SA-7687.
  • McMichael G.A., R.A. Harnish, B.J. Bellgraph, J.A. Carter, K.D. Ham, P.S. Titzler, and M.S. Hughes. 2010. Migratory Behavior and Survival of Juvenile Salmonids in the Lower Columbia River and Estuary in 2009. PNNL-19545. Richland, WA: Pacific Northwest National Laboratory. Migratory Behavior and Survival of Juvenile Salmonids in the Lower Columbia River and Estuary in 2009
  • Panther J.L., R.S. Brown, G.L. Gaulke, C.M. Woodley, and K.A. Deters. 2010. Influence of Incision Location on Transmitter Loss, Healing, Incision Lengths, Suture Retention, and Growth of Juvenile Chinook Salmon. PNNL-19192. Richland, WA: Pacific Northwest National Laboratory. Influence of Incision Location on Transmitter Loss, Healing, Incision Lengths, Suture Retention, and Growth of Juvenile Chinook Salmon
  • Perkins W.A., P.S. Titzler, M.C. Richmond, J.A. Serkowski, S.E. Kallio, and B.J. Bellgraph. 2010. Acoustic Doppler Current Profiler Surveys of Velocity Downstream of Albeni Falls Dam. PNNL-19816. Richland, WA: Pacific Northwest National Laboratory. Acoustic Doppler Current Profiler Surveys of Velocity Downstream of Albeni Falls Dam
  • Poston T.M., J.P. Duncan, and R.L. Dirkes. 2010. Hanford Site Environmental Report for Calendar Year 2009. PNNL-19455 Rev. 0. Richland, WA: Pacific Northwest National Laboratory. Hanford Site Environmental Report for Calendar Year 2009
  • Simmons M., T.M. Poston, B.L. Tiller, A. Stegen, K.D. Hand, and J.M. Brandenberger. 2010. Canada Geese at the Hanford Site – Trends in Reproductive Success, Migration Patterns, and Contaminant Concentrations. PNNL-19212. Richland, WA: Pacific Northwest National Laboratory. Canada Geese at the Hanford Site – Trends in Reproductive Success, Migration Patterns, and Contaminant Concentrations
  • Stephenson J.R., A.J. Gingerich, R.S. Brown, B.D. Pflugrath, Z. Deng, T.J. Carlson, and M. Langeslay, et al. 2010. "Assessing barotrauma in neutrally and negatively bouyant juvenile salmonids exposed to simulated hydro-turbine passage using a mobile aquatic barotrauma laboratory." Fisheries Research 106, no. 3:271–278. PNNL-SA-72828. doi:10.1016/j.fishres.2010.08.006
  • Tagestad J.D. 2010. Analysis and Mapping of Vegetation and Habitat for the Hart Mountain National Antelope Refuge. PNNL-19437. Richland, WA: Pacific Northwest National Laboratory. Analysis and Mapping of Vegetation and Habitat for the Hart Mountain National Antelope Refuge
  • Tagestad J.D. 2010. Analysis and Mapping of Vegetation and Habitat for the Sheldon National Wildlife Refuge. PNNL-19438. Richland, WA: Pacific Northwest National Laboratory. Analysis and Mapping of Vegetation and Habitat for the Sheldon National Wildlife Refuge
  • Titzler P.S., G.A. McMichael, and J.A. Carter. 2010. "Autonomous Acoustic Receiver Deployment and Mooring Techniques for Use in Large Rivers and Estuaries." North American Journal of Fisheries Management 30, no. 4:853-859. PNNL-SA-68361. doi:10.1577/M09-143.1
  • Yu X., A.J. Petrocchi, D.K. Craig, C.S. Glantz, D.M. Trott, J.T. Ciolek, and P. Lu, et al. 2010. "The development and application of the chemical mixture methodology in analysis of potential health impacts from airborne release in emergencies." Journal of Applied Toxicology 30, no. 6:513-524. PNNL-SA-72418. doi:10.1002/jat.1558

2009

  • Arntzen E.V. 2009. Temperature and Water Depth Monitoring Within Chum Salmon Spawning Habitat Below Bonneville Dam -- Annual Report -- October 2007-September 2008. PNNL-18561. Richland, WA: Pacific Northwest National Laboratory. Temperature and Water Depth Monitoring Within Chum Salmon Spawning Habitat Below Bonneville Dam -- Annual Report -- October 2007-September 2008
  • Arntzen E.V., D.R. Geist, K.J. Murray, J. Vavrinec, E.M. Dawley, and D.E. Schwartz. 2009. "Influence of the Hyporheic Zone on Supersaturated Gas Exposure to Incubating Chum Salmon." North American Journal of Fisheries Management 29, no. 6:1714-1727. PNNL-SA-62788. doi:10.1577/M08-212.1
  • Arntzen E.V., K.D. Hand, K.M. Carter, D.R. Geist, K.J. Murray, E.M. Dawley, and V.I. Cullinan, et al. 2009. Total Dissolved Gas Effects on Incubating Chum Salmon Below Bonneville Dam. PNNL-18081. Richland, WA: Pacific Northwest National Laboratory. Total Dissolved Gas Effects on Incubating Chum Salmon Below Bonneville Dam
  • Baldwin B.R., A.D. Peacock, M. Gan, C.T. Resch, E.V. Arntzen, A.N. Smithgall, and S. Pfiffner, et al. 2009. "In-Well Sediment Incubators to Evaluate Microbial Community Stability and Dynamics following Bioimmobilization of Uranium." Remediation 19, no. 4:73-89. PNNL-SA-67155. doi:10.1002/rem.20218
  • Becker J.M., J.D. Tagestad, C.A. Duberstein, and J.L. Downs. 2009. Sage-Grouse and Wind Energy: Biology, Habits, and Potential Effects from Development. PNNL-18567. Richland, WA: Pacific Northwest National Laboratory. Sage-Grouse and Wind Energy: Biology, Habits, and Potential Effects from Development
  • Brown R.S., T.J. Carlson, A.E. Welch, J.R. Stephenson, C.S. Abernethy, B.D. Ebberts, and M. Langeslay, et al. 2009. "Assessment of Barotrauma from Rapid Decompression of Depth-Acclimated Juvenile Chinook Salmon Bearing Radiotelemetry Transmitters." Transactions of the American Fisheries Society 138, no. 6:1285-1301. PNNL-SA-72829.
  • Buchanan R.A., R.A. Buchanan, J.R. Skalski, and G.A. McMichael. 2009. "Differentiating mortality from delayed migration in subyearling fall Chinook salmon (Oncorhynchus tshawytscha)." Canadian Journal of Fisheries and Aquatic Sciences 66, no. 12:2243-2255. PNWD-SA-8403. doi:10.1139/F09-154
  • Carter J.A., G.A. McMichael, I.D. Welch, R.A. Harnish, and B.J. Bellgraph. 2009. Seasonal Juvenile Salmonid Presence and Migratory Behavior in the Lower Columbia River. PNNL-18246. Richland, WA: Pacific Northwest National Laboratory. Seasonal Juvenile Salmonid Presence and Migratory Behavior in the Lower Columbia River
  • Deng Z., R.P. Mueller, and M.C. Richmond. 2009. "Measuring water velocity using DIDSON and image cross-correlation techniques." In Waterpower XVI: New Roles for Hydro in a Changing World, July 27-30, 2009, Spokane, Washington, Paper No. 130. Washington Dc:US Army Corps of Engineers. PNNL-SA-64821.
  • Deters K.A., R.S. Brown, K.M. Carter, and J.W. Boyd. 2009. Performance Assessment of Suture Type in Juvenile Chinook Salmon Surgically Implanted with Acoustic Transmitters. PNNL-18010. Richland, WA: Pacific Northwest National Laboratory. Performance Assessment of Suture Type in Juvenile Chinook Salmon Surgically Implanted with Acoustic Transmitters
  • Duncan J.P., T.M. Poston, and R.L. Dirkes. 2009. Summary of the Hanford Site Environmental Report for Calendar Year 2008. PNNL-18427 SUM. Richland, WA: Pacific Northwest National Laboratory. Summary of the Hanford Site Environmental Report for Calendar Year 2008
  • Durham R.E., and M.R. Sackschewsky. 2009. L-325 Sagebrush Habitat Mitigation Project: FY2009 Compensation Area Monitoring Report. PNNL-18824. Richland, WA: Pacific Northwest National Laboratory. L-325 Sagebrush Habitat Mitigation Project: FY2009 Compensation Area Monitoring Report
  • Guy C.S., E.W. Oldenburg, P.C. Gerrity, and P.C. Gerrity. 2009. "Conditional capture probability for Scaphirhynchus spp. in drifting trammel nets." North American Journal of Fisheries Management 29, no. 3:817-822. PNNL-SA-61037. doi:10.1577/M08-171.1
  • Johnson G.E., M.C. Richmond, J.B. Hedgepeth, G.R. Ploskey, M.G. Anderson, Z. Deng, and F. Khan, et al. 2009. Smolt Responses to Hydrodynamic Conditions in Forebay Flow Nets of Surface Flow Outlets, 2007. PNNL-17387. Richland, WA: Pacific Northwest National Laboratory. Smolt Responses to Hydrodynamic Conditions in Forebay Flow Nets of Surface Flow Outlets, 2007
  • Khan F., G.E. Johnson, and M.A. Weiland. 2009. Hydroacoustic Evaluation of Overwintering Summer Steelhead Fallback and Kelt Passage at The Dalles Dam 2008-2009. PNNL-18590. Richland, WA: Pacific Northwest National Laboratory. Hydroacoustic Evaluation of Overwintering Summer Steelhead Fallback and Kelt Passage at The Dalles Dam 2008-2009
  • Leek R., J.Q. Wu, J.Q. Wu, L. Wang, T.P. Hanrahan, M.E. Barber, and H. Qiu, et al. 2009. "Heterogeneous characteristics of streambed saturated hydraulic conductivity of the Touchet River, south eastern Washington, USA." Hydrological Processes 23, no. 8:1236-1246. PNWD-SA-8305.
  • Ploskey G.R., M.A. Weiland, D.M. Faber, Z. Deng, G.E. Johnson, J.S. Hughes, and S.A. Zimmerman, et al. 2009. Survival Rates of Juvenile Salmonids Passing Through the Bonneville Dam and Spillway in 2008. PNNL-18748. Richland, WA: Pacific Northwest National Laboratory. Survival Rates of Juvenile Salmonids Passing Through the Bonneville Dam and Spillway in 2008
  • Poston T.M., J.P. Duncan, and R.L. Dirkes. 2009. Hanford Site Environmental Report for Calendar Year 2008. PNNL-18427. Richland, WA: Pacific Northwest National Laboratory. Hanford Site Environmental Report for Calendar Year 2008
  • Richmond M.C., Z. Deng, C.A. McKinstry, R.P. Mueller, T.J. Carlson, and D.D. Dauble. 2009. "Response Relationship Between Juvenile Salmon and an Autonomous Sensor in Turbulent Flows." Fisheries Research 97, no. 1-2:134-139. PNNL-SA-51955. doi:10.1016/j.fishres.2009.01.011
  • Sackschewsky M.R., and J.L. Downs. 2009. Area C borrow Site Habitat Assessment. PNNL-18902. Richland, WA: Pacific Northwest National Laboratory. Area C borrow Site Habitat Assessment
  • Weiland M.A., G.R. Ploskey, J.S. Hughes, Z. Deng, T. Fu, T.J. Monter, and G.E. Johnson, et al. 2009. Acoustic Telemetry Evaluation of Juvenile Salmonid Passage and Survival at John Day Dam with Emphasis on the Prototype Surface Flow Outlet, 2008. PNNL-18890. Richland, WA: Pacific Northwest National Laboratory. Acoustic Telemetry Evaluation of Juvenile Salmonid Passage and Survival at John Day Dam with Emphasis on the Prototype Surface Flow Outlet, 2008
  • Weiland M.A., J. Kim, W.T. Nagy, and G.E. Johnson. 2009. Evaluation of Steelhead Kelt Passage into the Bonneville Dam Second Powerhouse Corner Collector Prior to the Juvenile Migration Seasons, 2007 and 2008. PNNL-18323. Richland, WA: Pacific Northwest National Laboratory. Evaluation of Steelhead Kelt Passage into the Bonneville Dam Second Powerhouse Corner Collector Prior to the Juvenile Migration Seasons, 2007 and 2008
  • Wigmosta M.S., L.J. Lane, J.D. Tagestad, and A.M. Coleman. 2009. "Hydrologic and Erosion Models To Assess Land Use and Management Practices Affecting Soil Erosion." Journal of Hydrologic Engineering 14, no. 1:27-41. PNNL-SA-53368.
  • Williams K.H., A. Kemna, M.J. Wilkins, M.J. Wilkins, J.L. Druhan, E.V. Arntzen, and A.L. N'Guessan, et al. 2009. "Geophysical Monitoring of Coupled Microbial and Geochemical Processes During Stimulated Subsurface Bioremediation." Environmental Science & Technology 43, no. 17:6717–6723. PNNL-SA-68077.

2008

  • Arntzen E.V., K.D. Hand, D.R. Geist, K.J. Murray, J. Panther, V.I. Cullinan, and E.M. Dawley, et al. 2008. Effects of Total Dissolved Gas on Chum Salmon Fry Incubating in the Lower Columbia River. PNNL-17132. Richland, WA: Pacific Northwest National Laboratory. Effects of Total Dissolved Gas on Chum Salmon Fry Incubating in the Lower Columbia River
  • Bellgraph B.J., C.S. Guy, W.M. Gardner, and S.A. Leathe. 2008. "Competition potential between saugers and walleyes in nonnative sympatry." Transactions of the American Fisheries Society 137, no. 3:790-800. PNNL-SA-60895. doi:10.1577/T07-102.1
  • Bellgraph B.J., R.S. Brown, J.R. Stephenson, A.E. Welch, K.A. Deters, and T.J. Carlson. 2008. "Healing Rate of Swim Bladders in Rainbow Trout." Transactions of the American Fisheries Society 137, no. 6:1791-1794. PNNL-SA-62735. doi:10.1577/T07-167.1
  • Carlson T.J., J.P. Duncan, and Z. Deng. 2008. Data Overview for Sensor Fish Samples Acquired at Ice Harbor, John Day, and Bonneville II Dams in 2005, 2006, and 2007. PNNL-17398. Richland, WA: Pacific Northwest National Laboratory. Data Overview for Sensor Fish Samples Acquired at Ice Harbor, John Day, and Bonneville II Dams in 2005, 2006, and 2007
  • Coleman A.M., M.S. Wigmosta, L.J. Lane, J.D. Tagestad, and D. Roberts. 2008. "A GIS-based Adaptive Management Decision Support System to Develop a Multi-Objective Framework: A case study utilizing GIS technologies and physically-based models to archieve improved decision making for site management." Journal of Map & Geography Libraries 4, no. 2:269 - 284. PNNL-SA-50845.
  • Duberstein C.A., and J.L. Downs. 2008. Characterization and Monitoring Data for Evaluating Constructed Emergent Sandbar Habitat in the Missouri River Mainstem. PNNL-17272. Richland, WA: Pacific Northwest National Laboratory. Characterization and Monitoring Data for Evaluating Constructed Emergent Sandbar Habitat in the Missouri River Mainstem
  • Duberstein C.A., M. Simmons, M.R. Sackschewsky, and J.M. Becker. 2008. Development of a Habitat Suitability Index Model for the Sage Sparrow on the Hanford Site. PNNL-16885. Richland, WA: Pacific Northwest National Laboratory. Development of a Habitat Suitability Index Model for the Sage Sparrow on the Hanford Site
  • Duncan J.P., T.M. Poston, and R.L. Dirkes. 2008. Summary of the Hanford Site Environmental Report for Calendar Year 2007. PNNL-17603 SUM. Richland, WA: Pacific Northwest National Laboratory. Summary of the Hanford Site Environmental Report for Calendar Year 2007
  • Durham R.E., and M.R. Sackschewsky. 2008. IDF Sagebrush Habitat Mitigation Project: FY2008 Compensation Area Monitoring Report. PNNL-17927. Richland, WA: Pacific Northwest National Laboratory. IDF Sagebrush Habitat Mitigation Project: FY2008 Compensation Area Monitoring Report
  • Durham R.E., and M.R. Sackschewsky. 2008. L-325 Sagebrush Habitat Mitigation Project: FY2008 Compensation Area Monitoring Report. PNNL-17926. Richland, WA: Pacific Northwest National Laboratory. L-325 Sagebrush Habitat Mitigation Project: FY2008 Compensation Area Monitoring Report
  • Ferguson J.W., G.R. Ploskey, K. Leonardsson, R.W. Zabel, and H. Lundqvist. 2008. "Combining Turbine Blade-Strike and Life Cycle Models to Assess Mitigation Strategies for Fish Passing Dams." Canadian Journal of Fisheries and Aquatic Sciences 65, no. 8:1568-1585. PNNL-SA-52911.
  • Fritz B.G., R.D. Mackley, E.V. Arntzen, D.P. Mendoza, and G.W. Patton. 2008. Methods for Assessing the Relative Amounts of Groundwater Discharge into the Columbia River and Measurement of Columbia River Gradients at the Hanford Site’s 300 Area. PNNL-17836. Richland, WA: Pacific Northwest National Laboratory. Methods for Assessing the Relative Amounts of Groundwater Discharge into the Columbia River and Measurement of Columbia River Gradients at the Hanford Site’s 300 Area
  • Geist D.R., C.J. Murray, T.P. Hanrahan, and Y. Xie. 2008. "A model of the effects of flow fluctuations on fall Chinook salmon spawning habitat availability in the Columbia River." North American Journal of Fisheries Management 28, no. 6:1894-1910. PNNL-SA-55022. doi:10.1577/M07-074.1
  • Geist D.R., E.V. Arntzen, C.J. Murray, K. McGrath, Y. Bott, and T.P. Hanrahan. 2008. "Influence of river level on temperature and hydraulic gradients in chum and fall Chinook salmon spawning areas downstream of Bonneville Dam, Columbia River." North American Journal of Fisheries Management 28, no. 1:30-41. PNNL-SA-53405.
  • Hanrahan T.P. 2008. "Effects of river discharge on hyporheic exchange flows in salmon spawning areas of a large gravel-bed river." Hydrological Processes 22, no. 1:127-141. PNNL-SA-49832. doi:10.1002/hyp.6605
  • Hockersmith E.E., R.S. Brown, and T.L. Liedtke. 2008. Comparative Performance of Acoustic-tagged and PIT-tagged Juvenile Salmonids. PNNL-16604. Richland, WA: Pacific Northwest National Laboratory. Comparative Performance of Acoustic-tagged and PIT-tagged Juvenile Salmonids
  • Johnson G.E., G.R. Ploskey, J. Hedgepeth, F. Khan, R.P. Mueller, W.T. Nagy, and M.C. Richmond, et al. 2008. "Reducing the Impacts of Hydroelectric Dams on Juvenile Anadromous Fishes: Bioengineering Evaluations Using Acoustic Imaging in the Columbia River, USA." In Dams: Impacts, Stability and Design, edited by WP Hayes & MC Barnes. 1-48. Hauppauge, New York:Nova Science Publishers. PNNL-SA-61525.
  • Larson K.B., T.M. Poston, and B.L. Tiller. 2008. Evaluation of Using Caged Clams to Monitor Contaminated Groundwater Exposure in the Near-Shore Environment of the Hanford Site 300 Area. PNNL-17270. Richland, WA: Pacific Northwest National Laboratory. Evaluation of Using Caged Clams to Monitor Contaminated Groundwater Exposure in the Near-Shore Environment of the Hanford Site 300 Area
  • Mackley R.D., G.V. Last, and C.H. Allwardt. 2008. Hanford Borehole Geologic Information System (HBGIS) Updated User’s Guide for Web-based Data Access and Export. PNNL-15362 Rev. 1. Richland, WA: Pacific Northwest National Laboratory. Hanford Borehole Geologic Information System (HBGIS) Updated User’s Guide for Web-based Data Access and Export
  • Mueller R.P., S.S. Southard, C.W. May, W.H. Pearson, and V.I. Cullinan. 2008. "Juvenile Coho Salmon Leaping Ability and Behavior in an Experimental Culvert Test Bed." Transactions of the American Fisheries Society 137, no. 4:941-950. PNWD-SA-7768. doi:10.1577/T06-244.1
  • Nichols W.E., M.L. Rockhold, and J.L. Downs. 2008. Compendium of Data for the Hanford Site (Fiscal Years 2004 to 2008) Applicable to Estimation of Recharge Rates. PNNL-17841. Richland, WA: Pacific Northwest National Laboratory. Compendium of Data for the Hanford Site (Fiscal Years 2004 to 2008) Applicable to Estimation of Recharge Rates
  • Oldenburg E.W., T.P. Hanrahan, R.A. Harnish, B.J. Bellgraph, J.P. Duncan, and C.H. Allwardt. 2008. 2005 Annual Synthesis Report, Pallid Sturgeon Population Assessment Program and Associated Fish Community Monitoring for the Missouri River. PNNL-17539. Richland, WA: Pacific Northwest National Laboratory. 2005 Annual Synthesis Report, Pallid Sturgeon Population Assessment Program and Associated Fish Community Monitoring for the Missouri River
  • Oldenburg E.W., T.P. Hanrahan, R.A. Harnish, B.J. Bellgraph, J.P. Duncan, and C.H. Allwardt. 2008. 2006 Annual Synthesis Report, Pallid Sturgeon Population Assessment Program and Associated Fish Community Monitoring for the Missouri River. PNNL-17583. Richland, WA: Pacific Northwest National Laboratory. 2006 Annual Synthesis Report, Pallid Sturgeon Population Assessment Program and Associated Fish Community Monitoring for the Missouri River
  • Oldenburg E.W., T.P. Hanrahan, R.A. Harnish, B.J. Bellgraph, J.P. Duncan, and C.H. Allwardt. 2008. Summary of the 2006 Annual Synthesis Report, Pallid Sturgeon Population Assessment Program and Associated Fish Community Monitoring for the Missouri River. PNNL-17582. Richland, WA: Pacific Northwest National Laboratory. Summary of the 2006 Annual Synthesis Report, Pallid Sturgeon Population Assessment Program and Associated Fish Community Monitoring for the Missouri River
  • Perkins C.J., M. Dorsey, S.M. Mckinney, J.W. Wilde, and J.P. Duncan. 2008. Hanford Site Near-Facility Environmental Monitoring Data Report for Calendar Year 2007- Appendix 2. PNNL-17603 APP.2. Richland, WA: Pacific Northwest National Laboratory. Hanford Site Near-Facility Environmental Monitoring Data Report for Calendar Year 2007- Appendix 2
  • Ploskey G.R., J.S. Hughes, F. Khan, J. Kim, B.L. Lamarche, G.E. Johnson, and E.Y. Choi, et al. 2008. Optimization of Concurrent Deployments of the Juvenile Salmon Acoustic Telemetry System and Other Hydroacoustic Equipment at John Day Dam. PNNL-17837. Richland, WA: Pacific Northwest National Laboratory. Optimization of Concurrent Deployments of the Juvenile Salmon Acoustic Telemetry System and Other Hydroacoustic Equipment at John Day Dam
  • Ploskey G.R., M.A. Weiland, and J. Kim. 2008. "Tradeoffs for Efficiently Passing Juvenile Salmonids through Bonneville Dam on the Lower Columbia River." In Fourth Reservoir Symposium: Balancing Fisheries Management and Water Uses for Impounded River Systems, June 7-9, 2007, Atlanta, Georgia, American Fisheries Society Symposium 62, edited by MS Allen, SM Sammons, and MJ Maceina, 325-347. Bethesda, Maryland:American Fisheries Society. PNNL-SA-56199.
  • Ploskey G.R., M.A. Weiland, J.S. Hughes, S.A. Zimmerman, R.E. Durham, E.S. Fischer, and J. Kim, et al. 2008. Acoustic Telemetry Studies of Juvenile Chinook Salmon Survival at the Lower Columbia Projects in 2006. PNNL-16560. Richland, WA: Pacific Northwest National Laboratory. Acoustic Telemetry Studies of Juvenile Chinook Salmon Survival at the Lower Columbia Projects in 2006
  • Ploskey G.R., M.A. Weiland, J.S. Hughes, S.A. Zimmerman, R.E. Durham, E.S. Fischer, and J. Kim, et al. 2008. Survival of Juvenile Chinook Salmon Passing the Bonneville Dam Spillway in 2007. PNNL-18113. Richland, WA: Pacific Northwest National Laboratory. Survival of Juvenile Chinook Salmon Passing the Bonneville Dam Spillway in 2007
  • Poston T.M., J.P. Duncan, and R.L. Dirkes. 2008. Hanford Site Environmental Report for Calendar Year 2007. PNNL-17603. Richland, WA: Pacific Northwest National Laboratory. Hanford Site Environmental Report for Calendar Year 2007
  • Reidel S., and M.A. Chamness. 2008. "Appendix E: Geology." In The Resource Conservation and Recovery Act Facility Investigation (RFI) Report for Hanford Single-Shell Tank Waste Management Areas, DOE/ORP-2008-01 Revision 0, edited by FM Mann. Richland, Washington:U.S. Department of Energy, Office of River Protection. PNNL-SA-31916.
  • Seifert C., B.E. Endicott-Popovsky, D.A. Frincke, P. Komisarczuk, R. Muschevici, and I.D. Welch. 2008. "Identifying and Analyzing Web Server Attacks." In Advances in Digital Forensics IV. 151-161. Boston, Massachusetts:Springer. PNNL-SA-73587.
  • Seifert C., B.E. Endicott-Popovsky, D.A. Frincke, P. Komisarczuk, R. Muschevici, and I.D. Welch. 2008. "Justifying the need for forensically ready protocols: A case study of identifying malicious web servers using client honeypots." In Proceedigns of the 4th Annual IFIP WG 11.9 International Conference on Digital Forensics, 151-161. Laxenburg:International Federation for Information Processing. PNNL-SA-73586.
  • Tagestad J.D., J. Bolte, M. Guzy, D.L. Woodruff, K. Humes, V. Walden, and M.S. Wigmosta, et al. 2008. PACIFIC NORTHWEST REGIONAL COLLABORATORY ANNUAL REPORT FOR SYNERGY VII (2007). PNNL-17271. Richland, WA: Pacific Northwest National Laboratory. PACIFIC NORTHWEST REGIONAL COLLABORATORY ANNUAL REPORT FOR SYNERGY VII (2007)
  • Xie Y., C.J. Murray, T.P. Hanrahan, and D.R. Geist. 2008. "Data Mining on Large Data Set for Predicting Salmon Spawning Habitat." In Proceedings of The 2008 International Conference on Data Mining (DMIN'08), edited by R. Stahlbock, S. F. Crone and S. Lessmann, 1, 233-239. Athens, Nevada:CSREA Press. PNNL-SA-59284.

2007

  • Arntzen E.V., D.R. Geist, J.L. Panther, and E. Dawley. 2007. Total Dissolved Gas Monitoring in Chum Salmon Spawning Gravels Below Bonneville Dam. PNNL-16200. Richland, WA: Pacific Northwest National Laboratory. Total Dissolved Gas Monitoring in Chum Salmon Spawning Gravels Below Bonneville Dam
  • Berejikian B.A., R.C. Endicott, D.M. VanDoornik, R.S. Brown, C.P. Tatara, and J. Atkins. 2007. "Spawning by female Chinook salmon can be detected by electromyogram telemetry." Transactions of the American Fisheries Society 136, no. 3:593-605. PNWD-SA-7392.
  • Berejikian B.A., R.S. Brown, C.P. Tatara, and S.J. Cooke. 2007. "Effects of telemetry transmitter placement on egg retention in naturally spawning, captively reared steelhead." North American Journal of Fisheries Management 27, no. 2:659-664. PNWD-SA-7367. doi:10.1577/M06-142.1
  • Brown R.S., C.P. Tatara, J.R. Stephenson, and B.A. Berejikian. 2007. "Evaluation of a new coded electromyogram transmitter for studying swimming behavior and energetics in free-ranging fish." North American Journal of Fisheries Management 27. PNWD-SA-7236. doi:10.1577/M06-149.1
  • Brown R.S., T.J. Carlson, A.E. Welch, J.R. Stephenson, C.S. Abernethy, C.A. McKinstry, and M. Theriault. 2007. Assessment of Barotrauma Resulting from Rapid Decompression of Depth Acclimated Juvenile Chinook Salmon Bearing Radio Telemetry Transmitters. PNNL-16790. Richland, WA: Pacific Northwest National Laboratory. Assessment of Barotrauma Resulting from Rapid Decompression of Depth Acclimated Juvenile Chinook Salmon Bearing Radio Telemetry Transmitters
  • Dauble D.D., Z. Deng, M.C. Richmond, R.A. Moursund, T.J. Carlson, C.L. Rakowski, and J.P. Duncan. 2007. Biological Assessment of the Advanced Turbine Design at Wanapum Dam, 2005. PNNL-16682. Richland, WA: Pacific Northwest National Laboratory. Biological Assessment of the Advanced Turbine Design at Wanapum Dam, 2005
  • Deng Z., G.R. Guensch, M.C. Richmond, M.A. Weiland, and T.J. Carlson. 2007. "Prototype Measurements of Pressure Fluctuations in The Dalles Dam Stilling Basin." Journal of Hydraulic Research 45, no. 5:674–678. PNNL-SA-42071.
  • Deng Z., T.J. Carlson, G.R. Ploskey, M.C. Richmond, and D.D. Dauble. 2007. "Evaluation of Blade-Strike Models for Estimating the Biological Performance of Kaplan Turbines." Ecological Modelling 208, no. 2-4:165-176. PNNL-SA-48765. doi:10.1016/j.ecolmodel.2007.05.019
  • Deng Z., T.J. Carlson, J.P. Duncan, and M.C. Richmond. 2007. "Applications of the Sensor Fish Technology." Hydro Review 26, no. 5:10-14. PNNL-SA-48821.
  • Deng Z., T.J. Carlson, J.P. Duncan, and M.C. Richmond. 2007. "Six-degree-of-freedom Sensor Fish design and instrumentation." Sensors 7, no. 12:3399-3415. PNNL-SA-57777.
  • Duberstein C.A., K.D. Ham, D.D. Dauble, and G.E. Johnson. 2007. The Independent Technical Analysis Process. PNNL-16507. Richland, WA: Pacific Northwest National Laboratory. The Independent Technical Analysis Process
  • Duncan J.P., K.W. Burk, M.A. Chamness, R.A. Fowler, B.G. Fritz, P.L. Hendrickson, and E.P. Kennedy, et al. 2007. Hanford Site National Environmental Policy Act (NEPA) Characterization. PNNL-6415 Rev 18. Richland, WA: Pacific Northwest National Laboratory. Hanford Site National Environmental Policy Act (NEPA) Characterization
  • DuPont J.M., R.S. Brown, and D.R. Geist. 2007. "Unique allacustrine migration patterns of a bull trout population in the Pend Oreille river drainage, Idaho." North American Journal of Fisheries Management 27, no. 4:1268-1275. PNWD-SA-7673. doi:10.1577/M06-137.1
  • Durham R.E., and M.R. Sackschewsky. 2007. Integrated disposal Facility Sagebrush Habitat Mitigation Project: FY2007 Compensation Area Monitoring Report. PNNL-16976. Richland, WA: Pacific Northwest National Laboratory. Integrated disposal Facility Sagebrush Habitat Mitigation Project: FY2007 Compensation Area Monitoring Report
  • Fritz B.G., and E.V. Arntzen. 2007. "Effect of Rapidly Changing River Stage on Uranium Flux through the Hyporheic Zone." Ground Water Volume 45, no. 6:753-760. PNNL-SA-52010.
  • Fritz B.G., N.P. Kohn, T.J. Gilmore, D. McFarland, E.V. Arntzen, R.D. Mackley, and G.W. Patton, et al. 2007. Investigation of the Hyporheic Zone at the 300 Area,Hanford Site. PNNL-16805. Richland, WA: Pacific Northwest National Laboratory. Investigation of the Hyporheic Zone at the 300 Area,Hanford Site
  • Hanrahan T.P. 2007. "Bedform morphology of salmon spawning areas in a large gravel-bed river." Geomorphology 86, no. 3-4:529-536. PNWD-SA-7419. doi:10.1016/j.geomorph.2006.09.017
  • Hanrahan T.P. 2007. "Large-scale spatial variability of riverbed temperature gradients in Snake River fall Chinook salmon spawning areas." River Research and Applications 23, no. 3:323-341. PNNL-SA-50169.
  • Johnson G.E., F. Khan, J.R. Skalski, C.L. Rakowski, M.C. Richmond, and J.A. Serkowski. 2007. Hydroacoustic Evaluation of Juvenile Salmonid Passage at The Dalles Dam Spillway, 2006. PNNL-16458. Richland, WA: Pacific Northwest National Laboratory. Hydroacoustic Evaluation of Juvenile Salmonid Passage at The Dalles Dam Spillway, 2006
  • McKinstry C.A., T.J. Carlson, and R.S. Brown. 2007. Derivation of Mortal Injury Metric for Studies of Rapid Decompression of Depth-Acclimated Physostomous Fish. PNNL-17080. Richland, WA: Pacific Northwest National Laboratory. Derivation of Mortal Injury Metric for Studies of Rapid Decompression of Depth-Acclimated Physostomous Fish
  • Miley T.B., A.L. Bunn, B.A. Napier, R.E. Peterson, and J.M. Becker. 2007. Current Conditions Risk Assessment for the 300-FF-5 Groundwater Operable Unit. PNNL-16454 Rev. 0. Richland, WA: Pacific Northwest National Laboratory. Current Conditions Risk Assessment for the 300-FF-5 Groundwater Operable Unit
  • Mueller R.P., and M. Simmons. 2007. Characterization of Gatewell Orifice Lighting at the Bonneville Dam Second Powerhouse and Compendium of Research on Light Guidance with Juvenile Salmonids. PNNL-17210. Richland, WA: Pacific Northwest National Laboratory. Characterization of Gatewell Orifice Lighting at the Bonneville Dam Second Powerhouse and Compendium of Research on Light Guidance with Juvenile Salmonids
  • Murray K. 2007. "Potential Effects of Sediment Erosion on Chum Salmon Redds in the Grays River, Washington." In 2007 GSA Annual Meeting and Exposition, Paper No. 65-1. Boulder, Colorado:Geological Society of America. PNNL-SA-56198.
  • Perkins W.A., M.C. Richmond, and G.A. McMichael. 2007. "Two-Dimensional Modeling of Time-Varying Hydrodynamics and Juvenile Chinook Salmon Habitat in the Hanford Reach of the Columbia River." In World Water and Environmental Resources Congress 2004, June 27 – July 1, 2004, Salt Lake City, Utah, USA, edited by Gerald Sehlke, Donald F. Hayes, David K. Stevens, 180. Reston, Virginia:American Society of Civil Engineers. PNWD-SA-6333. doi:10.1061/40737(2004)180
  • Ploskey G.R., J. Kim, M.A. Weiland, J.S. Hughes, and E.S. Fischer. 2007. Re-Analysis of Hydroacoustic Fish-Passage Data from Bonneville Dam after Spill-Discharge Corrections. PNNL-16386. Richland, WA: Pacific Northwest National Laboratory. Re-Analysis of Hydroacoustic Fish-Passage Data from Bonneville Dam after Spill-Discharge Corrections
  • Poston T.M., R.W. Hanf, J.P. Duncan, and R.L. Dirkes. 2007. Hanford Site Environmental Report for Calender Year 2006. PNNL-16623. Richland, WA: Pacific Northwest National Laboratory. Hanford Site Environmental Report for Calender Year 2006
  • Reidel S.P., and M.A. Chamness. 2007. Geology Data Package for the Single-Shell Tank Waste Management Areas at the Hanford Site. PNNL-15955 Rev. 1. Richland, WA: Pacific Northwest National Laboratory. Geology Data Package for the Single-Shell Tank Waste Management Areas at the Hanford Site
  • Reidel S.P., and M.A. Chamness. 2007. Geology Data Package for the Single-Shell Tank Waste Management Areas at the Hanford Site. PNNL-15955. Richland, WA: Pacific Northwest National Laboratory. Geology Data Package for the Single-Shell Tank Waste Management Areas at the Hanford Site
  • Richmond M.C., T.J. Carlson, J.A. Serkowski, C.B. Cook, J.P. Duncan, and W.A. Perkins. 2007. Characterizing the Fish Passage Environment at The Dalles Dam Spillway: 2001-2004. PNNL-16521. Richland, WA: Pacific Northwest National Laboratory. Characterizing the Fish Passage Environment at The Dalles Dam Spillway: 2001-2004
  • Sackschewsky M.R., and J.L. Downs. 2007. Ecological Data in Support of the Tank Closure and Waste Management Environmental Impact Statement. Part 2: Results of Spring 2007 Field Surveys. PNNL-16620. Richland, WA: Pacific Northwest National Laboratory. Ecological Data in Support of the Tank Closure and Waste Management Environmental Impact Statement. Part 2: Results of Spring 2007 Field Surveys
  • Tagestad J.D., and J.L. Downs. 2007. Landscape Measures of Rangeland Condition in the BLM Owyhee Pilot Project: Shrub Canopy Mapping, Vegetation Classification, and Detection of Anomalous Land Areas. PNNL-17209. Richland, WA: Pacific Northwest National Laboratory. Landscape Measures of Rangeland Condition in the BLM Owyhee Pilot Project: Shrub Canopy Mapping, Vegetation Classification, and Detection of Anomalous Land Areas

2006

  • Arntzen E.V., D.R. Geist, and P.E. Dresel. 2006. "Effects of Fluctuating River flow on Groundwater/Surface Water Mixing in the Hyporheic Zone of a Regulated, Large Cobble Bed River." River Research and Applications 22, no. 8:937-946. PNNL-SA-46549. doi:10.1002/rra.947
  • Bellgraph B.J., B.E. Thompson, D.B. Hayes, and T.S. Riley. 2006. "Growth of age-0 steelhead (Oncorhynchus mykiss) and brook trout (Salvelinus fontinalis) in the Pine River watershed, Alcona County, Michigan." Journal of Freshwater Ecology 21, no. 4:687-692. PNNL-SA-53627.
  • Brown R.S., D.R. Geist, and M.G. Mesa. 2006. "Use of Electromyogram Telemetry to Assess Swimmng Activity of Adult Spring Chinook Salmon Migrating Past a Columbia River Dam." Transactions of the American Fisheries Society 135, no. 2:281-287. PNNL-SA-43071. doi:10.1577/T05-223.1
  • Brown R.S., D.R. Geist, K.A. Deters, and M.A. Grassel. 2006. "Effects of surgically implanted acoustic transmitters >2% of body mass on the swimming performance, survival, and growth of juvenile sockeye and Chinook salmon." Journal of Fish Biology 69, no. 6:1626-1638. PNWD-SA-7235. doi:10.1111/j.1095-8649.2006.01227.x
  • Cook C.B., B. Dibrani, J.A. Serkowski, M.C. Richmond, P.S. Titzler, and G.W. Dennis. 2006. Acoustic Doppler Current Profiler Measurements in the Tailrace at John Day Dam. PNNL-15627. Richland, WA: Pacific Northwest National Laboratory. Acoustic Doppler Current Profiler Measurements in the Tailrace at John Day Dam
  • Cook C.B., B. Dibrani, M.C. Richmond, M.D. Bleich, P.S. Titzler, and T. Fu. 2006. Hydraulic Characteristics of the Lower Snake River During Periods of Juvenile Fall Chinook Migration. PNNL-15532. Richland, WA: Pacific Northwest National Laboratory. Hydraulic Characteristics of the Lower Snake River During Periods of Juvenile Fall Chinook Migration
  • Dauble D.D., R.A. Moursund, and M.D. Bleich. 2006. "Swimming behaviour of juvenile Pacific lamprey, Lampetra tridentata." Environmental Biology of Fishes 75, no. 2:167-171. PNNL-SA-40609. doi:10.1007/s10641-005-4698-7
  • Fritz B.G., F. Khan, and D.P. Mendoza. 2006. "Evaluation of airflow patterns following procedures established by NUREG-1400." Health Physics. Operational Radiation Safety 91, no. 8:S18-S23. PNNL-SA-47754.
  • Geist D.R., C.S. Abernethy, K.D. Hand, V.I. Cullinan, J.A. Chandler, and P. Groves. 2006. "Survival, development, and growth of fall Chinook salmon embryos, alevin, and fry exposed to variable thermal and dissolved oxygen regimes." Transactions of the American Fisheries Society 135, no. 6:1462-1477. PNWD-SA-7229.
  • Geist D.R., C.S. Abernethy, K.D. Hand, V.I. Cullinan, J.A. Chandler, and P. Groves. 2006. "Survival, development, and growth of Snake River fall Chinook salmon Embryos, Alevins, and Fry Exposed to Variable Thermal and Dissolved Oxygen Regimes." Transactions of the American Fisheries Society 135, no. 6:1462-1477. PNWD-SA-7223. doi:10.1577/T05-294.1
  • Horton D.G., and M.A. Chamness. 2006. Borehole Data Package for RCRA Well 299-W22-47 at Single-Shell Tank Waste Management Area S-SX, Hanford Site, Washington. PNNL-15775. Richland, WA: Pacific Northwest National Laboratory. Borehole Data Package for RCRA Well 299-W22-47 at Single-Shell Tank Waste Management Area S-SX, Hanford Site, Washington
  • Horton D.G., and M.A. Chamness. 2006. Borehole Data Package for Two RCRA Wells 299-W11-25B and 299-W11-46 at Single-Shell Tank Waste Management Area T, Hanford Site, Washington. PNNL-15776. Richland, WA: Pacific Northwest National Laboratory. Borehole Data Package for Two RCRA Wells 299-W11-25B and 299-W11-46 at Single-Shell Tank Waste Management Area T, Hanford Site, Washington
  • Johnson G.E., F. Khan, J. Hedgepeth, R.P. Mueller, C.L. Rakowski, M.C. Richmond, and J.A. Serkowski, et al. 2006. Hydroacoustic Evaluation of Juvenile Salmonid Passage at The Dalles Dam Sluiceway, 2005. PNNL-15540. Richland, WA: Pacific Northwest National Laboratory. Hydroacoustic Evaluation of Juvenile Salmonid Passage at The Dalles Dam Sluiceway, 2005
  • McGrath K.E., E. Dawley, and D.R. Geist. 2006. Total Dissolved Gas Effects on Fishes of the Lower Columbia River. PNNL-15525. Richland, WA: Pacific Northwest National Laboratory. Total Dissolved Gas Effects on Fishes of the Lower Columbia River
  • Mueller R.P., R.A. Moursund, and M.D. Bleich. 2006. "Tagging Juvenile Pacific Lamprey with Passive Integrated Transponders: Methodology, Short-Term Mortality, and Influence on Swimming Performance." North American Journal of Fisheries Management 26, no. 2:361-366. PNNL-SA-54928. doi:10.1577/M05-017.1
  • Mueller R.P., R.A. Moursund, and M.D. Bleich. 2006. "Tagging Juvenile Pacific Lamprey with Passive Integrated Transponders: Methodology, Short-Term Mortality, and Influence on Swimming Performance." North American Journal of Fisheries Management 26. PNNL-SA-45887. doi:10.1577/M05-017.1
  • Mueller R.P., R.S. Brown, H.H. Hop, and L. Moulton. 2006. "Video and acoustic camera techniques for studying fish under ice: a review and comparison." Reviews in Fish Biology and Fisheries 16, no. 2:213-226. PNNL-SA-48542. doi:10.1007/s11160-006-9011-0
  • Mueller R.P., R.S. Brown, H.H. Hop, and L. Moulton. 2006. "Video and acoustic camera techniques for studying fish under ice: a review and comparison." Reviews in Fish Biology and Fisheries 16, no. 2:213-226. PNWD-SA-6821.
  • Ploskey G.R., G.E. Johnson, M.A. Weiland, F. Khan, R.P. Mueller, J.A. Serkowski, and C.L. Rakowski, et al. 2006. "Acoustic Camera Evaluation of Juvenile Salmonid Approach and Fate at Surface Flow Outlets of Two Hydropower Dams." In HydroVision 2006, 13 pages. Kansas City, Missouri:HCI Publications. PNNL-SA-48572.
  • Ploskey G.R., M.A. Weiland, S.A. Zimmerman, J.S. Hughes, K.E. Bouchard, E.S. Fischer, and C.R. Schilt, et al. 2006. Hydroacoustic Evaluation of Fish Passage Through Bonneville Dam in 2005. PNNL-15944. Richland, WA: Pacific Northwest National Laboratory. Hydroacoustic Evaluation of Fish Passage Through Bonneville Dam in 2005

2005

  • Alexander A.K., M.R. Sackschewsky, and C.A. Duberstein. 2005. Use of Artificial Burrows by Burrowing Owls (Athene cunicularia) at the HAMMER Facility on the U.S. Department of Energy Hanford Site. PNNL-15414. Richland, WA: Pacific Northwest National Laboratory. Use of Artificial Burrows by Burrowing Owls (Athene cunicularia) at the HAMMER Facility on the U.S. Department of Energy Hanford Site
  • Antonio E.J., B.L. Tiller, S.L. Domotor, and K.A. Higley. 2005. "The U.S. Department of Energy's Regulatory and Evaluation Framework for Demonstrating Radiation Protection of the Environment: Implementation at the Hanford Site." In International Conference on Protection of the Environment from the Effects of Ionizing Radiation, 175-192. Vienna:International Atomic Energy Agency. PNNL-SA-39633.
  • Carlson T.J., and C.S. Abernethy. 2005. Pilot Study of the Effects of Simulated Turbine Passage Pressure on Juvenile Chinook Salmon Acclimated with Access to Air at Absolute Pressures Greater than Atmospheric. PNNL-15011. Richland, WA: Pacific Northwest National Laboratory. Pilot Study of the Effects of Simulated Turbine Passage Pressure on Juvenile Chinook Salmon Acclimated with Access to Air at Absolute Pressures Greater than Atmospheric
  • Carlson T.J., J.P. Duncan, and R.L. Johnson. 2005. Characterization of Pump Flow at the Grand Coulee Pumping Station for Fish Passage, 2004. PNNL-14998. Richland, WA: Pacific Northwest National Laboratory. Characterization of Pump Flow at the Grand Coulee Pumping Station for Fish Passage, 2004
  • Deng Z., G.R. Guensch, C.A. McKinstry, R.P. Mueller, D.D. Dauble, and M.C. Richmond. 2005. "Evaluation of Fish-Injury Mechanisms During Exposure to Turbulent Shear Flow." Canadian Journal of Fisheries and Aquatic Sciences 62, no. 7:1513–1522. PNNL-SA-42142.
  • Deng Z., M.C. Richmond, R.P. Mueller, J.P. Duncan, and T.J. Carlson. 2005. "Laboratory study of biological response of juvenile salmon subjected to turbulent shear flows." In Proceedings of Waterpower XIV, Advancing Technology for Sustainable Energy, Austin, Texas, July 18-22, 2005, 15 pp. Kansas City, Missouri:HCI Publications. PNNL-SA-44206.
  • Deng Z., T.J. Carlson, G.R. Ploskey, and M.C. Richmond. 2005. Evaluation of Blade-Strike Models for Estimating the Biological Performance of Large Kaplan Hydro Turbines. PNNL-15370. Richland, WA: Pacific Northwest National Laboratory. Evaluation of Blade-Strike Models for Estimating the Biological Performance of Large Kaplan Hydro Turbines
  • Faber D.M., M.E. Hanks, S.A. Zimmerman, J.R. Skalski, and P.W. Dillingham. 2005. The Distribution and Flux of Fish in the Forebay of The Dalles Dam in 2003. PNNL-14628. Richland, WA: Pacific Northwest National Laboratory. The Distribution and Flux of Fish in the Forebay of The Dalles Dam in 2003
  • Ham K.D., J.J. Anderson, and J.A. Vucelick. 2005. Effect of Multiple Turbine Passage on Juvenile Snake River Salmonid Survival. PNNL-15450. Richland, WA: Pacific Northwest National Laboratory. Effect of Multiple Turbine Passage on Juvenile Snake River Salmonid Survival
  • Hanrahan T.P., D.R. Geist, and E.V. Arntzen. 2005. "Habitat quality of historic Snake River fall Chinook salmon spawning locations and implications for incubation survival: part 1, substrate quality." River Research and Applications 21, no. 5:455-467. PNWD-SA-6142.
  • Johnson G.E., M.E. Hanks, F. Khan, C.B. Cook, J. Hedgepeth, R.P. Mueller, and C.L. Rakowski, et al. 2005. Hydroacoustic Evaluation of Juvenile Salmonid Passage at The Dalles Dam in 2004. PNNL-15180. Richland, WA: Pacific Northwest National Laboratory. Hydroacoustic Evaluation of Juvenile Salmonid Passage at The Dalles Dam in 2004
  • Johnson R.L., M. Simmons, C.A. McKinstry, C.S. Simmons, C.B. Cook, R.S. Brown, and D.K. Tano, et al. 2005. Strobe Light Deterrent Efficacy Test and Fish Behavior Determination at Grand Coulee Dam Third Powerplant Forebay. PNNL-15007. Richland, WA: Pacific Northwest National Laboratory. Strobe Light Deterrent Efficacy Test and Fish Behavior Determination at Grand Coulee Dam Third Powerplant Forebay
  • Last G.V., R.D. Mackley, and R.R. Saripalli. 2005. Hanford Borehole Geologic Information System (HBGIS). PNNL-15362. Richland, WA: Pacific Northwest National Laboratory. Hanford Borehole Geologic Information System (HBGIS)
  • McKinstry C.A., M. Simmons, C.S. Simmons, and R.L. Johnson. 2005. "Statistical assessment of fish behavior from split-beam hydro-acoustic sampling." Fisheries Research 72, no. 1:29-44. PNNL-SA-41592.
  • McMichael G.A., C.A. McKinstry, J.A. Vucelick, and J. Lukas. 2005. "Fall Chinook Salmon Spawning Activity Versus Daylight and Flow in the Tailrace of a Large Hydroelectric Dam." North American Journal of Fisheries Management 25, no. 2:573-580. PNWD-SA-6368. doi:10.1577/M04-044.1
  • McMichael G.A., C.L. Rakowski, B.B. James, and J. Lukas. 2005. "Estimated Fall Chinook Salmon Survival to Emergence in Dewatered Redds in a Shallow Side Channel of the Columbia River." North American Journal of Fisheries Management 25, no. 3:876-884. PNWD-SA-6653.
  • Neitzel D.A., A.L. Bunn, S.D. Cannon, J.P. Duncan, R.A. Fowler, B.G. Fritz, and D.W. Harvey, et al. 2005. Hanford Site National Environmental Policy Act (NEPA) Characterization Report, Revision 17. PNNL-6415 Rev. 17. Richland, WA: Pacific Northwest National Laboratory. Hanford Site National Environmental Policy Act (NEPA) Characterization Report, Revision 17
  • Ploskey G.R., G.E. Johnson, A.E. Giorgi, R.L. Johnson, J.R. Stevenson, C.R. Schilt, and P.N. Johnson, et al. 2005. Synthesis of Biological Reports on Juvenile Fish Passage and Survival at Bonneville Dam through 2005. PNNL-15041. Richland, WA: Pacific Northwest National Laboratory. Synthesis of Biological Reports on Juvenile Fish Passage and Survival at Bonneville Dam through 2005
  • Ploskey G.R., M.A. Weiland, C.R. Schilt, J. Kim, P.N. Johnson, M.E. Hanks, and D.S. Patterson, et al. 2005. Hydroacoustic Evaluation of Fish Passage through Bonneville Dam in 2004. PNNL-15249. Richland, WA: Pacific Northwest National Laboratory. Hydroacoustic Evaluation of Fish Passage through Bonneville Dam in 2004
  • Tiller B.L., J.D. Marco, and W.H. Rickard. 2005. "Metal Concentrations, Foraging Distances, and Fledging Success of Great Blue Herons Nesting Along the Hanford Reach of the Columbia River." Environmental Monitoring and Assessment 104, no. 1-3:71-79. PNNL-SA-37990.
  • Weiland M.A., R.P. Mueller, T.J. Carlson, Z. Deng, and C.A. McKinstry. 2005. Characterization of Bead Trajectories Through the Draft Tube of a Turbine Physical Model. PNNL-14879. Richland, WA: Pacific Northwest National Laboratory. Characterization of Bead Trajectories Through the Draft Tube of a Turbine Physical Model.

2004

2003

2002

2001

2000

  • Dauble D.D., and R.P. Mueller. 2000. "Difficulties in estimating survival for adult chinook salmon in the Columbia and Snake rivers." Fisheries 25, no. 8:24-34. PNNL-SA-31602.
  • Geist D.R., C.S. Abernethy, S.L. Blanton, and V.I. Cullinan. 2000. "The use of electromyogram telemetry to estimate energy expenditure of adult fall chinook salmon." Transactions of the American Fisheries Society 129, no. 1:126-135. PNNL-SA-27849.
  • Johnson G.E., N.S. Adams, R.L. Johnson, D.W. Rondorf, D.D. Dauble, and T.Y. Barila. 2000. "Evaluation of the Prototype Surface Bypass for Salmonid Smolts in Spring 1996 and 1997 at Lower Granite Dam on the Snake River, Washington." Transactions of the American Fisheries Society 129, no. 2:381-397. PNWD-SA-5610.
  • Johnson R.L., and G.E. Johnson. 2000. "Fish Behavior Relative to a Prototype Surface Bypass and Collector (SBC) at Lower Granite Dam Using Innovative Hydroacoustic Techniques." In Advances in Fish Passage Technology, edited by Mufeed Odeh, 57-67. Bethesda, Maryland:American Fisheries Society. PNWD-SA-4665.
  • Johnson R.L., and R.A. Moursund. 2000. "Evaluation of Juvenile Salmon Behavior at Bonneville Dam, Columbia River, Using a Multibeam Technique." Aquatic Living Resources 13, no. 5:313-318. PNNL-SA-33731.
  • Neitzel D.A., E.J. Antonio, C.J. Fosmire, R.A. Fowler, C.S. Glantz, S.M. Goodwin, and D.W. Harvey, et al. 2000. Hanford Site National Environmental Policy Act (NEPA) Characterization. PNNL-6415 Rev. 12. Richland, WA: Pacific Northwest National Laboratory. Hanford Site National Environmental Policy Act (NEPA) Characterization
  • Neitzel D.A., M.C. Richmond, D.D. Dauble, R.P. Mueller, R.A. Moursund, C.S. Abernethy, and G.R. Guensch. 2000. Laboratory Studies on the Effects of Shear on Fish. PNNL-13323. Richland, WA: Pacific Northwest National Laboratory. Laboratory Studies on the Effects of Shear on Fish
  • Petrie G.M., V.I. Cullinan, L.L. Cadwell, J.L. Downs, E.M. Perry, and J. Turner. 2000. "Integration of Hyperspectral Data for Rangeland Characterization." In International Archives of Photogrammetry and Remote Sensing (IAPRS), 33, 1142-1148. Stuttgardt:ISPRS. PNNL-SA-32954.
  • Tiller B.L., R.K. Zufelt, S.D. Turner, L.L. Cadwell, L. Bender, and G.K. Turner. 2000. Population Characteristics and Seasonal Movement Patterns of the Rattlesnake Hills Elk Herd - Status Report 2000. PNNL-13331. Richland, WA: Pacific Northwest National Laboratory. Population Characteristics and Seasonal Movement Patterns of the Rattlesnake Hills Elk Herd - Status Report 2000

1999

  • Antonio E.J., C.J. Fosmire, R.A. Fowler, S.M. Goodwin, D.W. Harvey, P.L. Hendrickson, and D.J. Hoitink, et al. 1999. Hanford Site National Environmental Policy Act (NEPA) Characterization. PNNL-6415 Rev 11. Richland, WA: Pacific Northwest National Laboratory. Hanford Site National Environmental Policy Act (NEPA) Characterization
  • Dauble D.D., R.L. Johnson, and A.P. Garcia. 1999. "Fall Chinook Salmon Spawning in the Tailraces of Lower Snake River Hydroelectric Projects." Transactions of the American Fisheries Society 128, no. 4:672-679. PNNL-SA-32120.
  • Fayer M.J., E.M. Murphy, J.L. Downs, F.O. Khan, C.W. Lindenmeier, and B.N. Bjornstad. 1999. Recharge Data Package for the Immobilized Low-Activity Waste 2001 Performance Assessment. PNNL-13033. Richland, WA: Pacific Northwest National Laboratory. Recharge Data Package for the Immobilized Low-Activity Waste 2001 Performance Assessment
  • Kickert R.N., G. Tonella, A. Simonov, and S.V. Krupa. 1999. "Predictive Modeling of Effects under Global Change." Environmental Pollution 100, no. 1-3:87-132. PNNL-SA-30071.
  • McDonald J.P., M.A. Chamness, and D.R. Newcomer. 1999. Water-Level Monitoring Plan for the Hanford Groundwater Monitoring Project. PNNL-13021. Richland, WA: Pacific Northwest National Laboratory. Water-Level Monitoring Plan for the Hanford Groundwater Monitoring Project
  • Mueller R.P., and D.R. Geist. 1999. Steelhead Spawning Surveys Near Locke Island, Hanford Reach of the Columbia River. PNNL-13055. Richland, WA: Pacific Northwest National Laboratory. Steelhead Spawning Surveys Near Locke Island, Hanford Reach of the Columbia River
  • Tiller B.L., and T.M. Poston. 1999. "Mule deer antlers as biomonitors of strontium-90 on the Hanford Site." Journal of Environmental Radioactivity 47, no. 1:29-44. PNNL-SA-31697.

1998

  • Downs J.L., and R.A. Black. 1998. "Leaf surface characteristics and gas exchange in Artemisia tridentata subspecies wyomingensis and tridentata." In Proceedings, Shrubland Ecotones, 108-112. Fort Collins, Colorado:US Department of Agriculture, Forest Service Rocky Mountain Forest & Range Experimental Station. PNNL-SA-31603.
  • Garrott R., J.G. Cook, M.M. Bernoco, J.F. Kirpatrick, L.L. Cadwell, S. Cherry, and B.L. Tiller. 1998. "Antibody Response of Elk Immunized with Porcine Zona Pellucida." Journal of Wildlife Diseases 34, no. 3:539-546. PNNL-SA-31713.
  • Heilman T., R. Garrott, L.L. Cadwell, and B.L. Tiller. 1998. "Behavioral Response of Free-Ranging Elk Treated with an Immunocontraceptive Vaccine." Journal of Wildlife Management 62, no. 1:243-250. PNNL-SA-31714. doi:10.2307/3802284
  • Johnson R.L., D.S. Daly, and G.E. Johnson. 1998. "Combining Hydroacoustics, Flow Models to Study Fish Behavior." Hydro Review XVII, no. 7:40-56. PNWD-SA-4485.
  • Mueller R.P., and D.R. Geist. 1998. Evaluation of Fall Chinook Salmon Spawning Adjacent to the In-Situ Redox Manipulation Treatability Test Site, Hanford Site, Washington. PNNL-12025. Richland, WA: Pacific Northwest National Laboratory. Evaluation of Fall Chinook Salmon Spawning Adjacent to the In-Situ Redox Manipulation Treatability Test Site, Hanford Site, Washington

Ecology

Additional Information